RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 COQ7Q99807 217 aa2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 XPO4Q9C0E2 1151 aaKnown RBP2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 RNF41Q9H4P4 317 aaPredicted RBP2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 Q9HAA7 133 aa2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 IL1RL2Q9HB29 575 aa2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 KCNN3Q9UGI6 736 aa2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 TUBGCP4Q9UGJ1 667 aa2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 SLC9A8Q9Y2E8 581 aa2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 RPH3AQ9Y2J0 694 aaPredicted RBP2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 MRPL11Q9Y3B7 192 aaKnown RBP2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 ARHGAP23Q9P227 1491 aa2.81□□□□□ -1.96
AC055855.1-201ENST00000489563 MAP1BP46821 2468 aaKnown RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SHROOM2Q13796 1616 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 RAD54L2Q9Y4B4 1467 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 WDR7Q9Y4E6 1490 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 MAP3K5Q99683 1374 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 IGHV3-16A0A0C4DH30 117 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 HTATSF1O43719 755 aaKnown RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SH3BGRLO75368 114 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SEMA4FO95754 770 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 PDGFBP01127 241 aaPredicted RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 PGK2P07205 417 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 PROS1P07225 676 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 GSTA1P08263 222 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 HCKP08631 526 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 IL4RP24394 825 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 CCL11P51671 97 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 NME3Q13232 169 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 CYLC2Q14093 348 aaPredicted RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 PDK1Q15118 436 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 HAGHQ16775 308 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SHROOM1Q2M3G4 852 aaPredicted RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 HKDC1Q2TB90 917 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 CNPY1Q3B7I2 92 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 ANKRD55Q3KP44 614 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 HIGD2BQ4VC39 106 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 HERC4Q5GLZ8 1057 aaPredicted RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 ZNF506Q5JVG8 444 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SEL1L3Q68CR1 1132 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 RHBDD2Q6NTF9 364 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 REG3GQ6UW15 175 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 ABRAXAS1Q6UWZ7 409 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 LUZP1Q86V48 1076 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 MLKLQ8NB16 471 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 OR52E1Q8NGJ3 308 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SLC13A3Q8WWT9 602 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 TMEM45BQ96B21 275 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 ANKRD9Q96BM1 317 aaPredicted RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 NSMCE2Q96MF7 247 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 DEFB118Q96PH6 123 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 TMEM237Q96Q45 408 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SPXQ9BT56 116 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 RPP25Q9BUL9 199 aaKnown RBP2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 TNMDQ9H2S6 317 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 DNPEPQ9ULA0 475 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 CCPG1Q9ULG6 757 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 ATG4BQ9Y4P1 393 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 TEX15Q9BXT5 2789 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 ZFYVE26Q68DK2 2539 aa2.8□□□□□ -1.96
AC055855.1-201ENST00000489563 SUPT6HQ7KZ85 1726 aaKnown RBP2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 WIZO95785 1651 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 NCOR2Q9Y618 2525 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 CCDC168Q8NDH2 2452 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 CEP250Q9BV73 2442 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 SPEGQ15772 3267 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 NPC1L1Q9UHC9 1359 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 A0A0U1RRA0 63 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 CFAP73A6NFT4 308 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 EI24O14681 340 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 ARPC1BO15143 372 aaKnown RBP2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 LRP3O75074 770 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 HPP00738 406 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 RENP00797 406 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 ALPPP05187 535 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 CCDC159P0C7I6 412 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 ALPPL2P10696 532 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 TMOD1P28289 359 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 SFNP31947 248 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 MATKP42679 507 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 BRCC3P46736 316 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 NPY2RP49146 381 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 NUMBP49757 651 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 CRMP1Q14194 572 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 CDC37Q16543 378 aaPredicted RBP2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 CCL14Q16627 93 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 VWA2Q5GFL6 755 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 WDR25Q64LD2 544 aaPredicted RBP2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 OR6B2Q6IFH4 312 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 MFSD7Q6UXD7 560 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 APOOLQ6UXV4 268 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 WDR88Q6ZMY6 472 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 YRDCQ86U90 279 aaKnown RBP2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 SLC22A16Q86VW1 577 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 PYROXD2Q8N2H3 581 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 LRRC17Q8N6Y2 441 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 COLGALT1Q8NBJ5 622 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 PHYHIPQ92561 330 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 P3H4Q92791 437 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 ACCSQ96QU6 501 aa2.79□□□□□ -1.96
AC055855.1-201ENST00000489563 PYGO2Q9BRQ0 406 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms