RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 NPIPA1Q9UND3 350 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 DTX4Q9Y2E6 619 aa15.99■□□□□ 0.15
MDC1-206ENST00000489540 MYO18BQ8IUG5 2567 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 TO15178 435 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 ASNA1O43681 348 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 COQ9O75208 318 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 SNNO75324 88 aaPredicted RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 CCL3P10147 92 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 PSPHP78330 225 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 RPP38P78345 283 aaKnown RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 SRSF11Q05519 484 aaKnown RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 RBPJQ06330 500 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.98■□□□□ 0.156e-6■□□□□ 8.6
MDC1-206ENST00000489540 ANKRD26P1Q6NSI1 321 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 LRRC34Q8IZ02 419 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 NATD1Q8N6N6 113 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 FAM13CQ8NE31 585 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 ZFP28Q8NHY6 868 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 ELP4Q96EB1 424 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 SECISBP2Q96T21 854 aaKnown RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 PRPF18Q99633 342 aaKnown RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 SH3GL2Q99962 352 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 C1orf50Q9BV19 199 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 ACSS1Q9NUB1 689 aaPredicted RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 PNPOQ9NVS9 261 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 ASIC5Q9NY37 505 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 NOP53Q9NZM5 478 aaKnown RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 C19orf53Q9UNZ5 99 aaPredicted RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 OSGIN2Q9Y236 505 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 GPR55Q9Y2T6 319 aaPredicted RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 CHCHD2Q9Y6H1 151 aaPredicted RBP15.98■□□□□ 0.15
MDC1-206ENST00000489540 BAHCC1Q9P281 2608 aa15.98■□□□□ 0.15
MDC1-206ENST00000489540 ANKRD33BA6NCL7 494 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 FRG2CA6NGY1 282 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 HMGB1P1B2RPK0 211 aaPredicted RBP15.97■□□□□ 0.15
MDC1-206ENST00000489540 SLCO1B7G3V0H7 640 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 KLF11O14901 512 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 TFECO14948 347 aaPredicted RBP15.97■□□□□ 0.15
MDC1-206ENST00000489540 PRPS1L1P21108 318 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 ABCD3P28288 659 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 MANFP55145 182 aaKnown RBP15.97■□□□□ 0.15
MDC1-206ENST00000489540 KCNK10P57789 538 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 PLGLB1Q02325 96 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 RPS6KA2Q15349 733 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 RNFT1Q5M7Z0 435 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 TBCELQ5QJ74 424 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 TMEM64Q6YI46 380 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 OR2L13Q8N349 312 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 FBXW8Q8N3Y1 598 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 OR10G3Q8NGC4 313 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 PPP1R36Q96LQ0 422 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 BTBD9Q96Q07 612 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 ANKRA2Q9H9E1 313 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 IL1RL2Q9HB29 575 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 MAPRE3Q9UPY8 281 aa15.97■□□□□ 0.15
MDC1-206ENST00000489540 ACOT7O00154 380 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 UPK1AO00322 258 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 SCAMP2O15127 329 aaKnown RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 ERN1O75460 977 aaKnown RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 PPM1BO75688 479 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 AGFG2O95081 481 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 ABCB1P08183 1280 aaPredicted RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 MC3RP41968 323 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 FRKP42685 505 aaPredicted RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 PPIAP62937 165 aaKnown RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 SRSF1Q07955 248 aaKnown RBP eCLIP15.96■□□□□ 0.15
MDC1-206ENST00000489540 ZNF385BQ569K4 471 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 TTMPQ5BVD1 217 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 TMEM107Q6UX40 140 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 NUP54Q7Z3B4 507 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 SLC22A16Q86VW1 577 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 GHDCQ8N2G8 530 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 OR5M3Q8NGP4 307 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 SPPL2AQ8TCT8 520 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 CIDECQ96AQ7 238 aaPredicted RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 VSTM2LQ96N03 204 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 NUF2Q9BZD4 464 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 TSPAN10Q9H1Z9 355 aaPredicted RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 MEAF6Q9HAF1 191 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 FOLH1BQ9HBA9 442 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 ATAD3AQ9NVI7 634 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 DDX18Q9NVP1 670 aaKnown RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 CNOT11Q9UKZ1 510 aaKnown RBP15.96■□□□□ 0.15
MDC1-206ENST00000489540 SLC5A6Q9Y289 635 aa15.96■□□□□ 0.15
MDC1-206ENST00000489540 ESPL1Q14674 2120 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 PINLYPA6NC86 204 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 G3V3Y1 287 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 WISP2O76076 250 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 GLSO94925 669 aaPredicted RBP15.95■□□□□ 0.14
MDC1-206ENST00000489540 STSP08842 583 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 G6PDP11413 515 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 LBPP18428 481 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 GPC1P35052 558 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 PIGAP37287 484 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 RFC3P40938 356 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 CLDN8P56748 225 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 FBXW4P57775 412 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 C21orf58P58505 322 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 OCRLQ01968 901 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 PLCXD2Q0VAA5 305 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms