RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 PRAMEF26H0Y7S4 382 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 HMGN4O00479 90 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 FAAHO00519 579 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ZSCAN9O15535 394 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ZW10O43264 779 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 PROM1O43490 865 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 SH3BP5O60239 455 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 LCMT2O60294 686 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 GABARAPO95166 117 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 SEMA4FO95754 770 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 BCHEP06276 602 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 HTR1AP08908 422 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF806P0C7X5 589 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ALAS2P22557 587 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 CBLP22681 906 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 PCSK6P29122 969 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 KRT20P35900 424 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 BUD31P41223 144 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ST13P50502 369 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 PLA2G16P53816 162 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 CDH12P55289 794 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 CDC42P60953 191 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 RPL6Q02878 288 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ILF3Q12906 894 aaKnown RBP eCLIP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 HSPB3Q12988 150 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 SLAMF1Q13291 335 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TP53BP2Q13625 1128 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 DGCR6Q14129 220 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 SUZ12Q15022 739 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TBCEQ15813 527 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ELOA3BQ3SY89 546 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 UBE2UQ5VVX9 321 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 GPR107Q5VW38 600 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 NIPAL1Q6NVV3 410 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 DUS1LQ6P1R4 473 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ISLR2Q6UXK2 745 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 CD300LDQ6UXZ3 194 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 RABEPKQ7Z6M1 372 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ABI3BPQ7Z7G0 1075 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 B3GNT8Q7Z7M8 397 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 GALNT5Q7Z7M9 940 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ASPGQ86U10 573 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 NRROSQ86YC3 692 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TAGAPQ8N103 731 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 C2orf73Q8N5S3 287 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 HORMAD2Q8N7B1 307 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 CAMKVQ8NCB2 501 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 BPIFB6Q8NFQ5 453 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ELOA3Q8NG57 546 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 OR5AK3PQ8NH89 298 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 RHOXF1Q8NHV9 184 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 OR1E3Q8WZA6 343 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TM4SF19Q96DZ7 209 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TMEM19Q96HH6 336 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 BBS4Q96RK4 519 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 SERINC2Q96SA4 455 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 MYOCQ99972 504 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TREX2Q9BQ50 279 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 GPR174Q9BXC1 333 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 DGCR6LQ9BY27 220 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 POLR2J2Q9GZM3 115 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 LHPPQ9H008 270 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 RACGAP1Q9H0H5 632 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 POLR2J3Q9H1A7 115 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 SRMSQ9H3Y6 488 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 GLIPR2Q9H4G4 154 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 PLGRKTQ9HBL7 147 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 PRDM8Q9NQV8 689 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ENAMQ9NRM1 1142 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ZCCHC3Q9NUD5 404 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 FKBP14Q9NWM8 211 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TEX10Q9NXF1 929 aaPredicted RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 CNOT2Q9NZN8 540 aaKnown RBP7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ENPP5Q9UJA9 477 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ACSL6Q9UKU0 697 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 CDC14AQ9UNH5 594 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 TESMINQ9Y4I5 508 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 PCDHGA6Q9Y5G7 932 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF780BQ9Y6R6 833 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 DSPPQ9NZW4 1301 aa7.96□□□□□ -1.14
VTI1A-207ENST00000489357 PRAMEF33A0A0G2JMD5 474 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 A0A1W2PPC4 97 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 BLACEA4D250 179 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 CLDN24A6NM45 220 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 OR52A4PA6NMU1 304 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 CLCA1A8K7I4 914 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 ISM1B1AKI9 464 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 RTCAO00442 366 aaKnown RBP7.95□□□□□ -1.14
VTI1A-207ENST00000489357 HAT1O14929 419 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 SLC31A1O15431 190 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 EMC8O43402 210 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 PRAMEF10O60809 474 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 MITFO75030 526 aaPredicted RBP7.95□□□□□ -1.14
VTI1A-207ENST00000489357 FAM20BO75063 409 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 BCL10O95999 233 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 C1QCP02747 245 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 SMIM10L1P0DMW3 83 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 NR2F6P10588 404 aa7.95□□□□□ -1.14
VTI1A-207ENST00000489357 NR2F1P10589 423 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms