RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ROGDIQ9GZN7 287 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 XPR1Q9UBH6 696 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 CLEC4AQ9UMR7 237 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 PJA2O43164 708 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 FGF17O60258 216 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 ABCB1P08183 1280 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-233ENST00000489352 ARAFP10398 606 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 IL11P20809 199 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 APEX1P27695 318 aaKnown RBP10.26□□□□□ -0.77
HDAC6-233ENST00000489352 ABCD3P28288 659 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 NMBRP28336 390 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 KCNC1P48547 511 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 CHN2P52757 468 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 IQCB1Q15051 598 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 GUSBP1Q15486 140 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 TSC22D1Q15714 1073 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 OCLNQ16625 522 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 SLC22A25Q6T423 547 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 TMIGD1Q6UXZ0 262 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 DGAT2L6Q6ZPD8 337 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 NUP54Q7Z3B4 507 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 MYO1HQ8N1T3 1032 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 SVOPLQ8N434 492 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 WDSUB1Q8N9V3 476 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 OR56A3Q8NH54 315 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 KCNJ9Q92806 393 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 MUCL1Q96DR8 90 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 GPR21Q99679 349 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 MAPKAP1Q9BPZ7 522 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 SOX7Q9BT81 388 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 OSBPL8Q9BZF1 889 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 C12orf49Q9H741 205 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 TREX1Q9NSU2 369 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 INTS10Q9NVR2 710 aaKnown RBP10.26□□□□□ -0.77
HDAC6-233ENST00000489352 ANO10Q9NW15 660 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 FBXO34Q9NWN3 711 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 NENFQ9UMX5 172 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 USP22Q9UPT9 525 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 EFR3BQ9Y2G0 817 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 MRPS18CQ9Y3D5 142 aaKnown RBP10.26□□□□□ -0.77
HDAC6-233ENST00000489352 KCNE2Q9Y6J6 123 aa10.26□□□□□ -0.77
HDAC6-233ENST00000489352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 LRP5LA4QPB2 252 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 EFCAB8A8MWE9 144 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 AKR1B10O60218 316 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 PPM1BO75688 479 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 OGNP20774 298 aaKnown RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 GSTM2P28161 218 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 TLX1P31314 330 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 FDFT1P37268 417 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 MARCKSL1P49006 195 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 CLDN15P56746 228 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 CRADDP78560 199 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 DHX9Q08211 1270 aaKnown RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 RAET1LQ5VY80 246 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 UGT3A1Q6NUS8 523 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 TMEM81Q6P7N7 255 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 EXOC3L1Q86VI1 746 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 ST13P4Q8IZP2 240 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 KRT78Q8N1N4 520 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 EEF1AKMT1Q8WVE0 214 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 KRT35Q92764 455 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 KISS1RQ969F8 398 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 KCNC2Q96PR1 638 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 SUCNR1Q9BXA5 334 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 RPF2Q9H7B2 306 aaKnown RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 ETNK1Q9HBU6 452 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 MYOZ1Q9NP98 299 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 TRMT6Q9UJA5 497 aaKnown RBP10.25□□□□□ -0.77
HDAC6-233ENST00000489352 IKZF3Q9UKT9 509 aa10.25□□□□□ -0.77
HDAC6-233ENST00000489352 PRAMEF25A6NGN4 478 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 CCT8L1PA6NM43 557 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 H0YC42 278 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 H3BML4 177 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 AQP8O94778 261 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 SNUPNO95149 360 aaKnown RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 GUCA1CO95843 209 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 APRTP07741 180 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 VSIG8P0DPA2 414 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 NAGAP17050 411 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 ARFIP2P53365 341 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 DVL1P1P54792 670 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 TPD52P55327 224 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 AP1S2P56377 157 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 IGLV3-21P80748 117 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 ACAP2Q15057 778 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 STK11Q15831 433 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 SPRED3Q2MJR0 410 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 SFRP5Q5T4F7 317 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 OR5M10Q6IEU7 315 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 CES3Q6UWW8 571 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 GLCCI1Q86VQ1 547 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 THOC6Q86W42 341 aaKnown RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 BBOF1Q8ND07 529 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 SRFBP1Q8NEF9 429 aaKnown RBP10.24□□□□□ -0.77
HDAC6-233ENST00000489352 OR2W6PQ8NHA6 318 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 FBF1Q8TES7 1133 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 TANKQ92844 425 aa10.24□□□□□ -0.77
HDAC6-233ENST00000489352 HPS1Q92902 700 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms