RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 TICAM1Q8IUC6 712 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 CTHRC1Q96CG8 243 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 OMA1Q96E52 524 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 C11orf24Q96F05 449 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-206ENST00000489142 GNRHR2Q96P88 292 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 NODALQ96S42 347 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 FAM215AQ9Y5M1 114 aa12.85□□□□□ -0.35
VTI1A-206ENST00000489142 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 KIAA1549Q9HCM3 1950 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 OR14I1A6ND48 311 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 GNB5O14775 395 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 BCKDKO14874 412 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 SUSD5O60279 629 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 CDH16O75309 829 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 ABCB1P08183 1280 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-206ENST00000489142 DRD2P14416 443 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 CASP3P42574 277 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 TMED10P49755 219 aaKnown RBP12.84□□□□□ -0.35
VTI1A-206ENST00000489142 CORO7P57737 925 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 DNAJB13P59910 316 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 SLC18A2Q05940 514 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 C2orf80Q0P641 193 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 PLCXD2Q0VAA5 305 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 PCLAFQ15004 111 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 TOMM20Q15388 145 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 FNDC7Q5VTL7 733 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 TMEM198Q66K66 360 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 TMEM211Q6ICI0 200 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 LURAP1LQ8IV03 231 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 OR10Q1Q8NGQ4 319 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 RND1Q92730 232 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 LCORQ96JN0 433 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-206ENST00000489142 TRIM8Q9BZR9 551 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 METTL7AQ9H8H3 244 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 GALNT9Q9HCQ5 603 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 SLC35C2Q9NQQ7 365 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 B4GALT7Q9UBV7 327 aa12.84□□□□□ -0.35
VTI1A-206ENST00000489142 MED12Q93074 2177 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 FIGNL2A6NMB9 653 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 KDM4EB2RXH2 506 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-206ENST00000489142 HCN1O60741 890 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 UGT2B11O75310 529 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 SPAG7O75391 227 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 PPM1BO75688 479 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 GLI4P10075 376 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 WNT3P56703 355 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 ZNF763Q0D2J5 394 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 HEPACAMQ14CZ8 416 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 WLSQ5T9L3 541 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 LIPMQ5VYY2 423 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 GALNT18Q6P9A2 607 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 PACS2Q86VP3 889 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 LIX1Q8N485 282 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 C17orf47Q8NEP4 570 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 OR7G2Q8NG99 324 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 RDH11Q8TC12 318 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 ZNF675Q8TD23 568 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 HGDQ93099 445 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 GFM2Q969S9 779 aaKnown RBP12.83□□□□□ -0.36
VTI1A-206ENST00000489142 TMBIM1Q969X1 311 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 SARAFQ96BY9 339 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 APOPT1Q96IL0 206 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 FAM111AQ96PZ2 611 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 BBS4Q96RK4 519 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 TTYH2Q9BSA4 534 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 MECRQ9BV79 373 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 ANGPTL4Q9BY76 406 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 PPCSQ9HAB8 311 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 GIMAP4Q9NUV9 329 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 SENP1Q9P0U3 644 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 SLC17A7Q9P2U7 560 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 CFL2Q9Y281 166 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 SLC6A5Q9Y345 797 aa12.83□□□□□ -0.36
VTI1A-206ENST00000489142 INTS1Q8N201 2190 aaKnown RBP12.82□□□□□ -0.36
VTI1A-206ENST00000489142 A0A0G2JNJ9 132 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 SERTM1A2A2V5 107 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 ANKRD33BA6NCL7 494 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 TMEM233B4DJY2 109 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 JUNP05412 331 aaKnown RBP12.82□□□□□ -0.36
VTI1A-206ENST00000489142 UROSP10746 265 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 DDCP20711 480 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 TACR1P25103 407 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 CHRNB4P30926 498 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 ADH7P40394 386 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 NCBP2P52298 156 aaKnown RBP eCLIP12.82□□□□□ -0.36
VTI1A-206ENST00000489142 IFFO1Q0D2I5 559 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 ERCC6LQ2NKX8 1250 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 EIPR1Q53HC9 387 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 TBCELQ5QJ74 424 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 C1orf185Q5T7R7 199 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 FAM71E1Q6IPT2 247 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 ANGPTL8Q6UXH0 198 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 NPSR1Q6W5P4 371 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
VTI1A-206ENST00000489142 MEX3BQ6ZN04 569 aaKnown RBP12.82□□□□□ -0.36
VTI1A-206ENST00000489142 TRIM46Q7Z4K8 759 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms