RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CDKL4Q5MAI5 379 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 AAGABQ6PD74 315 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 ZNF704Q6ZNC4 412 aaPredicted RBP14.62□□□□□ -0.07
USP48-210ENST00000489108 GALNT12Q8IXK2 581 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 ZNF610Q8N9Z0 462 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 C17orf47Q8NEP4 570 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 CD244Q9BZW8 370 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 KLHL4Q9C0H6 718 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 KLRF1Q9NZS2 232 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 CHMP2BQ9UQN3 213 aa14.62□□□□□ -0.07
USP48-210ENST00000489108 FRG2CA6NGY1 282 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 SLC22A20A6NK97 555 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 PGRMC2O15173 223 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 CD5LO43866 347 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 CGAP01215 116 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 FAM58BPP0C7Q3 252 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 NR2F6P10588 404 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 TBXA2RP21731 343 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 GPX3P22352 226 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 TCEA1P23193 301 aaKnown RBP14.61□□□□□ -0.07
USP48-210ENST00000489108 CNTFP26441 200 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 GMPRP36959 345 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 SNTA1Q13424 505 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 OR2A2Q6IF42 318 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 CHMP1BQ7LBR1 199 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 ZNF611Q8N823 705 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 HUS1BQ8NHY5 278 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 ZNF845Q96IR2 970 aaPredicted RBP14.61□□□□□ -0.07
USP48-210ENST00000489108 SFXN2Q96NB2 322 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 ZNF717Q9BY31 904 aaPredicted RBP14.61□□□□□ -0.07
USP48-210ENST00000489108 EHD3Q9NZN3 535 aa14.61□□□□□ -0.07
USP48-210ENST00000489108 PRR14LQ5THK1 2151 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 A0A0A6YYD5 115 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 DNALI1O14645 258 aaPredicted RBP14.6□□□□□ -0.07
USP48-210ENST00000489108 TMCC2O75069 709 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 UGT2B11O75310 529 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 WISP3O95389 354 aaPredicted RBP14.6□□□□□ -0.07
USP48-210ENST00000489108 AIFM1O95831 613 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 CCDC166P0CW27 439 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 EPB42P16452 691 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 S1PR1P21453 382 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 PIK3R1P27986 724 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 SERPINB1P30740 379 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 SRD5A2P31213 254 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 BSGP35613 385 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 CHRFAM7AQ494W8 412 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 BEX5Q5H9J7 111 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 STEAP4Q687X5 459 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 CYP20A1Q6UW02 462 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 PLCZ1Q86YW0 608 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 SPC24Q8NBT2 197 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 PDPRQ8NCN5 879 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 OR7G1Q8NGA0 311 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 FIG4Q92562 907 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 OMA1Q96E52 524 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 MTERF1Q99551 399 aaKnown RBP14.6□□□□□ -0.07
USP48-210ENST00000489108 CENPKQ9BS16 269 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 WDR41Q9HAD4 459 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 POPDC3Q9HBV1 291 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 LYARQ9NX58 379 aaKnown RBP14.6□□□□□ -0.07
USP48-210ENST00000489108 FBXL2Q9UKC9 423 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 LAMP3Q9UQV4 416 aa14.6□□□□□ -0.07
USP48-210ENST00000489108 PRAMEF25A6NGN4 478 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 HS3ST1O14792 307 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 EMC8O43402 210 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 ZIC3O60481 467 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 CD1DP15813 335 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 NT5EP21589 574 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 MGAT5Q09328 741 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 PPP1R7Q15435 360 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 BCL2A1Q16548 175 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 LRRC70Q7Z2Q7 622 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 GRK7Q8WTQ7 553 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 EXT2Q93063 718 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 DDX31Q9H8H2 851 aaKnown RBP14.59□□□□□ -0.07
USP48-210ENST00000489108 CAB39LQ9H9S4 337 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 PSD3Q9NYI0 1048 aa14.59□□□□□ -0.07
USP48-210ENST00000489108 PHGDHO43175 533 aaKnown RBP14.58□□□□□ -0.08
USP48-210ENST00000489108 GBAP04062 536 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 CD8BP10966 210 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 PTX3P26022 381 aaPredicted RBP14.58□□□□□ -0.08
USP48-210ENST00000489108 IDUAP35475 653 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 PIK3CBP42338 1070 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 XKP51811 444 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 ARFIP1P53367 373 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 SLC12A2P55011 1212 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 HMGCS1Q01581 520 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 PLCXD2Q0VAA5 305 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 EXOC3L2Q2M3D2 409 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 OR5M10Q6IEU7 315 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 OR52E8Q6IFG1 317 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 GRHL2Q6ISB3 625 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 FAM111BQ6SJ93 734 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 UBQLNLQ8IYU4 475 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 TRIM58Q8NG06 486 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 CAVIN3Q969G5 261 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 REPS1Q96D71 796 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 ZBED6CLQ96FA7 236 aaPredicted RBP14.58□□□□□ -0.08
USP48-210ENST00000489108 PLPPR2Q96GM1 343 aa14.58□□□□□ -0.08
USP48-210ENST00000489108 LCORQ96JN0 433 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms