RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 USP53Q70EK8 1073 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 C16orf62Q7Z3J2 963 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 VN1R4Q7Z5H5 301 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 TSEN54Q7Z6J9 526 aaKnown RBP6.23□□□□□ -1.41
HDLBP-243ENST00000488923 TAF8Q7Z7C8 310 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 B3GNT8Q7Z7M8 397 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 GTF2IRD2Q86UP8 949 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 PARGQ86W56 976 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 ANKRD13BQ86YJ7 626 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 SLC5A8Q8N695 610 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 SMYD1Q8NB12 490 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 AQP11Q8NBQ7 271 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 FAM46DQ8NEK8 389 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 NUP43Q8NFH3 380 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 TSTD1Q8NFU3 115 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 CADM4Q8NFZ8 388 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 OR13H1Q8NG92 308 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 RHOXF1Q8NHV9 184 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 FLVCR1-AS1Q8TAF5 88 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 BAHD1Q8TBE0 780 aaPredicted RBP6.23□□□□□ -1.41
HDLBP-243ENST00000488923 ADAMTS15Q8TE58 950 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 APOBEC4Q8WW27 367 aaKnown RBP6.23□□□□□ -1.41
HDLBP-243ENST00000488923 HMGB4Q8WW32 186 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 RAB8BQ92930 207 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 TMIGD2Q96BF3 282 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 ELP4Q96EB1 424 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 OTUB1Q96FW1 271 aaPredicted RBP6.23□□□□□ -1.41
HDLBP-243ENST00000488923 KLHDC7BQ96G42 594 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 TOE1Q96GM8 510 aaKnown RBP6.23□□□□□ -1.41
HDLBP-243ENST00000488923 CRELD1Q96HD1 420 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 PRRC1Q96M27 445 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 COG8Q96MW5 612 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 ZNF681Q96N22 645 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 MS4A4EQ96PG1 132 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 FNDC11Q9BVV2 318 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 TEX12Q9BXU0 123 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 DGCR6LQ9BY27 220 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 UCK2Q9BZX2 261 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 RACGAP1Q9H0H5 632 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 CHRDQ9H2X0 955 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 KLHL31Q9H511 634 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 ARMC7Q9H6L4 198 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 PALMDQ9NP74 551 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 POLE3Q9NRF9 147 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 CLN6Q9NWW5 311 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 WSB2Q9NYS7 404 aaPredicted RBP6.23□□□□□ -1.41
HDLBP-243ENST00000488923 APOBEC3BQ9UH17 382 aaKnown RBP6.23□□□□□ -1.41
HDLBP-243ENST00000488923 ENPP5Q9UJA9 477 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 PILRAQ9UKJ1 303 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 DUSP12Q9UNI6 340 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 ATG4BQ9Y4P1 393 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 PCDHGA6Q9Y5G7 932 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 TRPM6Q9BX84 2022 aa6.23□□□□□ -1.41
HDLBP-243ENST00000488923 MYO7AQ13402 2215 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 PRRC2BQ5JSZ5 2229 aaKnown RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 PCM1Q15154 2024 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ELOA3CA0A087WX78 387 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 A0A0G2JN53 185 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 A0A1W2PPC1 479 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ELOA3DA6NLF2 546 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 SNTNA6NMZ2 147 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ZAR1LA6NP61 321 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 CLCA1A8K7I4 914 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 H0Y8X5 98 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 KHNYNO15037 678 aaKnown RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 PGRMC2O15173 223 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 OR10H3O60404 316 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 SRPX2O60687 465 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 CNOT3O75175 753 aaKnown RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 COQ9O75208 318 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 GABARAPO95166 117 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ATP1B1P05026 303 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ALPPP05187 535 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 HMGN2P05204 90 aaKnown RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 GUSBP08236 651 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ZNF888P0CJ79 500 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 CHRNB1P11230 501 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 PIPP12273 146 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 CYP4B1P13584 511 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 PORP16435 677 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 POLR2CP19387 275 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 MAGP20916 626 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 AGXTP21549 392 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 CD27P26842 260 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 XKP51811 444 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 CRISP1P54107 249 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 PRKAG1P54619 331 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 SNRPGP62308 76 aaKnown RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 HHEXQ03014 270 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 EMX1Q04741 257 aaPredicted RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ST3GAL3Q11203 375 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 PUM1Q14671 1186 aaKnown RBP eCLIP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 LASP1Q14847 261 aaKnown RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 LARS2Q15031 903 aaKnown RBP6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ELOCQ15369 112 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 FAM214AQ32MH5 1076 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 ELOA3BQ3SY89 546 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 GPAT3Q53EU6 434 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 UBE2UQ5VVX9 321 aa6.22□□□□□ -1.41
HDLBP-243ENST00000488923 MEDAGQ5VYS4 303 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms