RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 KHKP50053 298 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 RRADP55042 308 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 TMPRSS3P57727 454 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 MTPNP58546 118 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 EBPQ15125 230 aaKnown RBP11.44□□□□□ -0.58
TRAIP-209ENST00000488860 DCAF10Q5QP82 559 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 HLA-DQA1Q5Y7H0 255 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 SAXO2Q658L1 398 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 TNFAIP8L2Q6P589 184 aaPredicted RBP11.44□□□□□ -0.58
TRAIP-209ENST00000488860 DLEU7Q6UYE1 221 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 HSDL2Q6YN16 418 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 C6orf120Q7Z4R8 191 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 RNF130Q86XS8 419 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 KBTBD2Q8IY47 623 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 ZNF615Q8N8J6 731 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 ZFP90Q8TF47 636 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 SLC9A6Q92581 669 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 ROPN1LQ96C74 230 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 C16orf58Q96GQ5 468 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 THOC3Q96J01 351 aaKnown RBP11.44□□□□□ -0.58
TRAIP-209ENST00000488860 CPPED1Q9BRF8 314 aaPredicted RBP11.44□□□□□ -0.58
TRAIP-209ENST00000488860 DEFB126Q9BYW3 111 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 SEMA4CQ9C0C4 833 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 LIN28AQ9H9Z2 209 aaKnown RBP11.44□□□□□ -0.58
TRAIP-209ENST00000488860 TPT1P8Q9HAU6 139 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 MMP25Q9NPA2 562 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 FAF1Q9UNN5 650 aaPredicted RBP11.44□□□□□ -0.58
TRAIP-209ENST00000488860 CFL2Q9Y281 166 aa11.44□□□□□ -0.58
TRAIP-209ENST00000488860 IGF2RP11717 2491 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 TRBV5-3A0A0A0MS03 114 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 C2orf92A0A1B0GVN3 265 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 A6NL46 340 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 A8MUI8 341 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 EVPLLA8MZ36 301 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 B2RBV5 119 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 FXYD1O00168 92 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 TAF4O00268 1085 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 PSMG1O95456 288 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 SERPINA7P05543 415 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 KRT16P08779 473 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ACP2P11117 423 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ICAM2P13598 275 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 MATN1P21941 496 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 CRATP43155 626 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 EMDP50402 254 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 GPR143P51810 404 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 MNAT1P51948 309 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 UCNP55089 124 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 RNF4P78317 190 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 SLC25A3Q00325 362 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 Q0VFX4 171 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 AIMP2Q13155 320 aaKnown RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 RAPSNQ13702 412 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 SELPLGQ14242 412 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ZNHIT3Q15649 155 aaPredicted RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 CRTC2Q53ET0 693 aaPredicted RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 COX20Q5RI15 118 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 IRAK1BP1Q5VVH5 260 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 FCRLBQ6BAA4 426 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 MFSD12Q6NUT3 480 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 C6orf89Q6UWU4 347 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 RINLQ6ZS11 566 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 CCDC121Q6ZUS5 278 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 SIRT6Q8N6T7 355 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 TMEM102Q8N9M5 508 aaPredicted RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 OR5D16Q8NGK9 328 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 FBXO27Q8NI29 283 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 BRIX1Q8TDN6 353 aaKnown RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ELP5Q8TE02 316 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 NEURL3Q96EH8 262 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 GIMAP5Q96F15 307 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ANKRD27Q96NW4 1050 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 OR7D2Q96RA2 312 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ACTRT3Q9BYD9 372 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 WWTR1Q9GZV5 400 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 OR51I1Q9H343 314 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ATP13A2Q9NQ11 1180 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 GPATCH2Q9NW75 528 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 PPIEQ9UNP9 301 aaKnown RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 URB1O60287 2271 aaKnown RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 ZFHX4Q86UP3 3567 aa11.43□□□□□ -0.58
TRAIP-209ENST00000488860 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
TRAIP-209ENST00000488860 WWP2O00308 870 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 ZFAND5O76080 213 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 UNC5CO95185 931 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 ALOX5P09917 674 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 T-ENOLP0DO92 83 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 PPIBP23284 216 aaKnown RBP11.42□□□□□ -0.58
TRAIP-209ENST00000488860 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
TRAIP-209ENST00000488860 NR0B1P51843 470 aaKnown RBP11.42□□□□□ -0.58
TRAIP-209ENST00000488860 CORO7P57737 925 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 PSME3P61289 254 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 AP2B1P63010 937 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 CXADRP78310 365 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 MYBPC3Q14896 1274 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 RUNDC3AQ59EK9 446 aa11.42□□□□□ -0.58
TRAIP-209ENST00000488860 RABL3Q5HYI8 236 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms