RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 PIGFQ07326 219 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 DGCR6Q14129 220 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 GANABQ14697 944 aaKnown RBP6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 RAB39AQ14964 217 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 SEC23BQ15437 767 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 NPTX1Q15818 432 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ARHGAP11BQ3KRB8 267 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 C14orf28Q4W4Y0 310 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 GPAT3Q53EU6 434 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ATAD3BQ5T9A4 648 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 GTF2IRD2BQ6EKJ0 949 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 LAIR1Q6GTX8 287 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZCCHC12Q6PEW1 402 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 DHRS4L2Q6PKH6 230 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 FAM111BQ6SJ93 734 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 GTF2IRD2Q86UP8 949 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 UBALD2Q8IYN6 164 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 C19orf47Q8N9M1 422 aaKnown RBP6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 SLC16A11Q8NCK7 471 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 SIMC1Q8NDZ2 872 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 OR13F1Q8NGS4 319 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 OR9A4Q8NGU2 314 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 CNIH3Q8TBE1 160 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZNF675Q8TD23 568 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 PHF10Q8WUB8 498 aaKnown RBP6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZFAND2BQ8WV99 257 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 APH1BQ8WW43 257 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 COL26A1Q96A83 441 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZG16BQ96DA0 208 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 HSPA12BQ96MM6 686 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 MS4A4EQ96PG1 132 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 NODALQ96S42 347 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 SLC38A3Q99624 504 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 DOK1Q99704 481 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ARHGDIGQ99819 225 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 CCDC3Q9BQI4 270 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 DGCR6LQ9BY27 220 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 UCK2Q9BZX2 261 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 DUSP15Q9H1R2 295 aaPredicted RBP6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 PIGUQ9H490 435 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZNF556Q9HAH1 456 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 FANCEQ9HB96 536 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ANKHQ9HCJ1 492 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ENAMQ9NRM1 1142 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 PLCXD1Q9NUJ7 323 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 PAK1IP1Q9NWT1 392 aaPredicted RBP6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 UCKL1Q9NWZ5 548 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 PTTG2Q9NZH5 202 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 ERVK-18Q9QC07 812 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 RHCGQ9UBD6 479 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 REV1Q9UBZ9 1251 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 AASSQ9UDR5 926 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 TMCC3Q9ULS5 477 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 A4GNTQ9UNA3 340 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 DOLKQ9UPQ8 538 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 MGAT4BQ9UQ53 548 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 RNF6Q9Y252 685 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 TPRKBQ9Y3C4 175 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 SIT1Q9Y3P8 196 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 CDH23Q9H251 3354 aa6.31□□□□□ -1.4
RN7SL561P-201ENST00000488553 CROCCQ5TZA2 2017 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 BLACEA4D250 179 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 FITM1A5D6W6 292 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 CCDC160A6NGH7 325 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZAR1LA6NP61 321 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 STK25O00506 426 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 FAAHO00519 579 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 BCAT2O15382 392 aaPredicted RBP6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 FOXS1O43638 330 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 XPNPEP2O43895 674 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 CTNSO60931 367 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 LDB3O75112 727 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 NME6O75414 186 aaPredicted RBP6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 RDH16O75452 317 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 PIAS2O75928 621 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 MED26O95402 600 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ZIC2O95409 532 aaPredicted RBP6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ADAP00813 363 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ALPPP05187 535 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 GUSBP08236 651 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ACP2P11117 423 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 OSMP13725 252 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 GABRB1P18505 474 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ITIH1P19827 911 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 S1PR1P21453 382 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 BCKDHBP21953 392 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 PCMT1P22061 227 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ELAVL4P26378 380 aaKnown RBP6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 ACVR2AP27037 513 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 DCKP27707 260 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 HOXA6P31267 233 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 PRKAR1BP31321 381 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 FMO3P31513 532 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 PDX1P52945 283 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 CRISP1P54107 249 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 EPHA4P54764 986 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 EMP3P54852 163 aa6.3□□□□□ -1.4
RN7SL561P-201ENST00000488553 SHC2P98077 582 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms