RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 HRH3Q9Y5N1 445 aa13.06□□□□□ -0.32
COL9A2-208ENST00000488463 MED12Q93074 2177 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 NUP214P35658 2090 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-208ENST00000488463 ANKRD33BA6NCL7 494 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 TFECO14948 347 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-208ENST00000488463 TO15178 435 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 TM9SF1O15321 606 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 BIRC5O15392 142 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 TBX19O60806 448 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 ZG16O60844 167 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 TRIM3O75382 744 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-208ENST00000488463 PSMG1O95456 288 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 IGHG3P01860 377 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 P04436 131 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 JUNP05412 331 aaKnown RBP13.05□□□□□ -0.32
COL9A2-208ENST00000488463 ABCB1P08183 1280 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CT45A8P0DMV1 189 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CT45A9P0DMV2 189 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 BCKDHAP12694 445 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 PPICP45877 212 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 PDE7AQ13946 482 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 RPS6KA2Q15349 733 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 ZNF385BQ569K4 471 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CT45A2Q5DJT8 189 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 PRAMEF20Q5VT98 475 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 FNDC7Q5VTL7 733 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 BICRALQ6AI39 1079 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 NPSR1Q6W5P4 371 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 GK5Q6ZS86 529 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 FAM47EQ6ZV65 393 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CROCCP2Q86T23 111 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 DOLPP1Q86YN1 238 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 PRR22Q8IZ63 422 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 TMEM251Q8N6I4 163 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CDC26Q8NHZ8 85 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 SPPL2AQ8TCT8 520 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 AGR3Q8TD06 166 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 LCORQ96JN0 433 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-208ENST00000488463 AMDHD1Q96NU7 426 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 BTBD9Q96Q07 612 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 SORT1Q99523 831 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 GLIPR2Q9H4G4 154 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 IL1RL2Q9HB29 575 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 PLEKHB1Q9UF11 243 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-208ENST00000488463 BCAP29Q9UHQ4 241 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 BAIAP2L1Q9UHR4 511 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CFL2Q9Y281 166 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 CSMD1Q96PZ7 3565 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 FBN2P35556 2912 aa13.05□□□□□ -0.32
COL9A2-208ENST00000488463 A0A087WV62 115 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 TRGV8A0A0C4DH27 118 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 A0A1B0GTH9 108 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 WDR91A4D1P6 747 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 FAM166BA8MTA8 275 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 PLOD2O00469 737 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 DYNC1I1O14576 645 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 ACOX3O15254 700 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 PPM1BO75688 479 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 LRATO95237 230 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 CHEK2O96017 543 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 SERPINE1P05121 402 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 CELA3AP09093 270 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 RFPL3SP0C7P2 107 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 NAGAP17050 411 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 DRD5P21918 477 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 MPIP34949 423 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 FRKP42685 505 aaPredicted RBP13.04□□□□□ -0.32
COL9A2-208ENST00000488463 MAGEA5P43359 124 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 WDR4P57081 412 aaKnown RBP13.04□□□□□ -0.32
COL9A2-208ENST00000488463 RPL38P63173 70 aaKnown RBP13.04□□□□□ -0.32
COL9A2-208ENST00000488463 ADORA2A-AS1P86434 159 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 RBPJQ06330 500 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 NNATQ16517 81 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 C6orf163Q5TEZ5 329 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 HIST2H2BCQ6DN03 193 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 TMEM81Q6P7N7 255 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 RGS9BPQ6ZS82 235 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 HDXQ7Z353 690 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 HOMEZQ8IX15 550 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 FAM9CQ8IZT9 166 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 FAM13CQ8NE31 585 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 OR5M3Q8NGP4 307 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 HGDQ93099 445 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 TLCD1Q96CP7 247 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 HSPBAP1Q96EW2 488 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 CCDC120Q96HB5 630 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 SECISBP2Q96T21 854 aaKnown RBP13.04□□□□□ -0.32
COL9A2-208ENST00000488463 DEFB127Q9H1M4 99 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 HAO1Q9UJM8 370 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 ENTPD4Q9Y227 616 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 TMED5Q9Y3A6 229 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 LIPGQ9Y5X9 500 aa13.04□□□□□ -0.32
COL9A2-208ENST00000488463 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.04□□□□□ -0.32
COL9A2-208ENST00000488463 PKDREJQ9NTG1 2253 aa13.03□□□□□ -0.32
COL9A2-208ENST00000488463 A0A1B0GVC2 190 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms