RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ADIPOR1Q96A54 375 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 ERP27Q96DN0 273 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 ELP4Q96EB1 424 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OTUB1Q96FW1 271 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 CHMP6Q96FZ7 201 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 VSTM2LQ96N03 204 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 SIGLEC12Q96PQ1 595 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 LMF1Q96S06 567 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 UTP23Q9BRU9 249 aaKnown RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 HES7Q9BYE0 225 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 TRIM4Q9C037 500 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 RNF32Q9H0A6 362 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 NXF5Q9H1B4 397 aaKnown RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 RABEP2Q9H5N1 569 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 CXorf36Q9H7Y0 433 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 FOLH1BQ9HBA9 442 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 ZIM2Q9NZV7 527 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 C19orf53Q9UNZ5 99 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 MAPRE3Q9UPY8 281 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 SNX8Q9Y5X2 465 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 NINQ8N4C6 2090 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 PLOD2O00469 737 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 NR5A2O00482 541 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 RNASET2O00584 256 aaKnown RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 SCN2BO60939 215 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 COQ9O75208 318 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 SLC22A3O75751 556 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 PGRP06401 933 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 CD1EP15812 388 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 NCF2P19878 526 aaPredicted RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 TRHRP34981 398 aaPredicted RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 CD96P40200 585 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 CASRP41180 1078 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 HLCSP50747 726 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 ARFIP2P53365 341 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 HBA1P69905 142 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 SRSF11Q05519 484 aaKnown RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 KLRB1Q12918 225 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 TP53BP2Q13625 1128 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 SQLEQ14534 574 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 MLC1Q15049 377 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 SPDYE7PQ495Y7 208 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 PRR30Q53SZ7 412 aaPredicted RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 LYPD8Q6UX82 237 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 Q6ZS92 163 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF227Q86WZ6 799 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 HPS6Q86YV9 775 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 CYP4Z2PQ8N1L4 340 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 TMEM156Q8N614 296 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 Q8NA96 180 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 LSM14AQ8ND56 463 aaKnown RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 MDS2Q8NDY4 140 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 SLC22A8Q8TCC7 542 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 C10orf82Q8WW14 230 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 OR5P2Q8WZ92 322 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 VPS33AQ96AX1 596 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 FAM120BQ96EK7 910 aaKnown RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 MS4A4EQ96PG1 132 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF385DQ9H6B1 395 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 NEUROD4Q9HD90 331 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 KLHL1Q9NR64 748 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 ZCCHC3Q9NUD5 404 aaKnown RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 FAM120CQ9NX05 1096 aaKnown RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 FAM53CQ9NYF3 392 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 KLHL14Q9P2G3 628 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 PRODH2Q9UF12 536 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 CFL2Q9Y281 166 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 B3GNT3Q9Y2A9 372 aa10.21□□□□□ -0.77
UBE4B-210ENST00000488228 YARS2Q9Y2Z4 477 aaKnown RBP10.21□□□□□ -0.77
UBE4B-210ENST00000488228 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 A0A0G2JMM0 328 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 RNF103-CHMP3A0A140T963 221 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 A0A1W2PPB8 328 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 A0A1W2PRS3 328 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 FAM234BA2RU67 622 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 A8MVJ9 347 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 KIR3DP1A8MWS1 328 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 EMC8O43402 210 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 ERN1O75460 977 aaKnown RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 SLC25A12O75746 678 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 NEURL1O76050 574 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 CPSF4O95639 269 aaKnown RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 CT45A8P0DMV1 189 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 CT45A9P0DMV2 189 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 DRD4P21917 467 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 CDKN2CP42773 168 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 MRPL19P49406 292 aaKnown RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 CYB561P49447 251 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 ATP4BP51164 291 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 POLR2JP52435 117 aaKnown RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 PRKAG1P54619 331 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 RPS26P62854 115 aaKnown RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 PLCXD2Q0VAA5 305 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 UBAP2LQ14157 1087 aaKnown RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 RCAN2Q14206 197 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 ZNF169Q14929 603 aaPredicted RBP10.2□□□□□ -0.78
UBE4B-210ENST00000488228 CT45A2Q5DJT8 189 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 ANXA8L1Q5VT79 327 aa10.2□□□□□ -0.78
UBE4B-210ENST00000488228 SPINK14Q6IE38 97 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms