RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 AKIRIN1Q9H9L7 192 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 PALMDQ9NP74 551 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 FKBP14Q9NWM8 211 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 RHBDL2Q9NX52 303 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 EURLQ9NYK6 297 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 UBAP1Q9NZ09 502 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 SPG21Q9NZD8 308 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 AKAP7Q9P0M2 348 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 C6orf203Q9P0P8 240 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 THEGQ9P2T0 379 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 FETUBQ9UGM5 382 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 LNPEPQ9UIQ6 1025 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 FBXL4Q9UKA2 621 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 POMT2Q9UKY4 750 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 CHMP2BQ9UQN3 213 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 ARL2BPQ9Y2Y0 163 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 HBS1LQ9Y450 684 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 HYOU1Q9Y4L1 999 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 ZFYVE16Q7Z3T8 1539 aa3.29□□□□□ -1.88
ECHDC1-217ENST00000488087 CD163L1Q9NR16 1453 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PRG4Q92954 1404 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 A0A1W2PP64 1363 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ATP8B3O60423 1300 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 UMODL1Q5DID0 1318 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PCDH11XQ9BZA7 1347 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 A0A0J9YWU9 116 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 A0A1W2PRV1 198 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 RGSL1A5PLK6 1076 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 A8MXQ7 604 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CENPBD1B2RD01 187 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 K7EPI3 171 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 NDC80O14777 642 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PGRMC2O15173 223 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SURF4O15260 269 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ALOX15BO15296 676 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 DCXO43602 365 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 VEGFDO43915 354 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SMPD2O60906 423 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SAP30O75446 220 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CSDE1O75534 798 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PDE5AO76074 875 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PNPP00491 289 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 AGTP01019 485 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 HLA-DPA1P20036 260 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CCNCP24863 283 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PRKAR2BP31323 418 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 GTF2H1P32780 548 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CTNNB1P35222 781 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 OR3A1P47881 315 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 GPC3P51654 580 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ARFIP1P53367 373 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 OR1D5P58170 312 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 BASP1P80723 227 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 DHODHQ02127 395 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SLC34A1Q06495 639 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SLC3A1Q07837 685 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 KLHL30Q0D2K2 578 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ABRQ12979 859 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 TRA2AQ13595 282 aaKnown RBP eCLIP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 GIT2Q14161 759 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 STK38Q15208 465 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 FAM189A2Q15884 450 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ACKR1Q16570 336 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CFAP221Q4G0U5 840 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 FAM106AQ4KMX7 169 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 HERC4Q5GLZ8 1057 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 KCTD16Q68DU8 428 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SNRNP48Q6IEG0 339 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF770Q6IQ21 691 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 RWDD4Q6NW29 188 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PODNL1Q6PEZ8 512 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 TTC23LQ6PF05 361 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 DHRS11Q6UWP2 260 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ISLR2Q6UXK2 745 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 NET1Q7Z628 596 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF444Q8N0Y2 327 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CSGALNACT2Q8N6G5 542 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 TMEM99Q8N816 258 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CHURC1Q8WUH1 139 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF606Q8WXB4 792 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 STARD8Q92502 1023 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 AP2M1Q96CW1 435 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 OMA1Q96E52 524 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 MOCOSQ96EN8 888 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 TMA16Q96EY4 203 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 GSDMAQ96QA5 445 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 RASL10BQ96S79 203 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF184Q99676 751 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SIKE1Q9BRV8 207 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CACNG6Q9BXT2 260 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 TRIM15Q9C019 465 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 DRC3Q9H069 523 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 CUEDC2Q9H467 287 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 MTHFD2LQ9H903 347 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 C12orf10Q9HB07 376 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 PLGRKTQ9HBL7 147 aa3.28□□□□□ -1.88
ECHDC1-217ENST00000488087 SAR1AQ9NR31 198 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms