RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CT45A2Q5DJT8 189 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 MPP7Q5T2T1 576 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 TRPM8Q7Z2W7 1104 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 KLHL7Q8IXQ5 586 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 CADM2Q8N3J6 435 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 ZNF397Q8NF99 534 aaPredicted RBP2.29□□□□□ -2.04
SMC4-219ENST00000487747 FNDC8Q8TC99 324 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 ADAMTS16Q8TE57 1224 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 MRPL53Q96EL3 112 aaKnown RBP2.29□□□□□ -2.04
SMC4-219ENST00000487747 ERO1AQ96HE7 468 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 CDKN2AIPNLQ96HQ2 116 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 GUCD1Q96NT3 240 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 SPAG8Q99932 426 aaPredicted RBP2.29□□□□□ -2.04
SMC4-219ENST00000487747 CARD9Q9H257 536 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 SLC26A1Q9H2B4 701 aa2.29□□□□□ -2.04
SMC4-219ENST00000487747 NFKBIL1Q9UBC1 381 aaPredicted RBP2.29□□□□□ -2.04
SMC4-219ENST00000487747 DIMT1Q9UNQ2 313 aaKnown RBP2.29□□□□□ -2.04
SMC4-219ENST00000487747 LRCOL1A6NCL2 159 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 YJEFN3A6XGL0 299 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 WWP2O00308 870 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 IFIT3O14879 490 aaKnown RBP2.28□□□□□ -2.04
SMC4-219ENST00000487747 CYP11B1P15538 503 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 RPS2P15880 293 aaKnown RBP2.28□□□□□ -2.04
SMC4-219ENST00000487747 GP5P40197 560 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 SLC26A2P50443 739 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 DAZ2Q13117 558 aaKnown RBP2.28□□□□□ -2.04
SMC4-219ENST00000487747 ZNF786Q8N393 782 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 UBTD2Q8WUN7 234 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 TM2D1Q9BX74 207 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 OR51J1Q9H342 316 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 DAZ3Q9NR90 486 aaKnown RBP2.28□□□□□ -2.04
SMC4-219ENST00000487747 LEF1Q9UJU2 399 aaPredicted RBP2.28□□□□□ -2.04
SMC4-219ENST00000487747 EXOC7Q9UPT5 735 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 TTLL3Q9Y4R7 772 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 POMT1Q9Y6A1 747 aa2.28□□□□□ -2.04
SMC4-219ENST00000487747 KIF26AQ9ULI4 1882 aaPredicted RBP2.28□□□□□ -2.04
SMC4-219ENST00000487747 MTCL1Q9Y4B5 1905 aaKnown RBP2.27□□□□□ -2.05
SMC4-219ENST00000487747 IGKV2-28A0A075B6P5 120 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 RANBP6O60518 1105 aaKnown RBP2.27□□□□□ -2.05
SMC4-219ENST00000487747 ZNF324O75467 553 aaPredicted RBP2.27□□□□□ -2.05
SMC4-219ENST00000487747 TOXO94900 526 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 GLCEO94923 617 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 IGKV2D-28P01615 120 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 PMELP40967 661 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 ZNF45Q02386 682 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 TRADDQ15628 312 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 HAGHQ16775 308 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 EPC2Q52LR7 807 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 XKR4Q5GH76 650 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 DDI2Q5TDH0 399 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 LRRC38Q5VT99 294 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 ASPHD2Q6ICH7 369 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 UFSP1Q6NVU6 142 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 C9orf40Q8IXQ3 194 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 DCAF4L2Q8NA75 395 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 BBS1Q8NFJ9 593 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 TSPY26PQ9H489 355 aa2.27□□□□□ -2.05
SMC4-219ENST00000487747 ZNF282Q9UDV7 671 aaPredicted RBP2.27□□□□□ -2.05
SMC4-219ENST00000487747 SH2D1BO14796 132 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 MMP23AO75900 390 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 KCNK10P57789 538 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 NFE2L1Q14494 772 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 MCOLN2Q8IZK6 566 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 OR6M1Q8NGM8 313 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 FAM46BQ96A09 425 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 PANX3Q96QZ0 392 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 IL4I1Q96RQ9 567 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 CPXM1Q96SM3 734 aa2.26□□□□□ -2.05
SMC4-219ENST00000487747 DDX28Q9NUL7 540 aaKnown RBP2.26□□□□□ -2.05
SMC4-219ENST00000487747 ZNF223Q9UK11 482 aaPredicted RBP2.26□□□□□ -2.05
SMC4-219ENST00000487747 KIR2DL5BA0A0G2JN68 375 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 KIR2DL5BA0A0G2JPC4 375 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 A0A1B0GUA9 196 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 ZNF254O75437 659 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 REC8O95072 547 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 SLC16A8O95907 504 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 PGK1P00558 417 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 TIMP1P01033 207 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 LDHCP07864 332 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 PTBP1P26599 531 aaKnown RBP eCLIP2.25□□□□□ -2.05
SMC4-219ENST00000487747 ACVR1BP36896 505 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 FRKP42685 505 aaPredicted RBP2.25□□□□□ -2.05
SMC4-219ENST00000487747 RPS10P46783 165 aaKnown RBP2.25□□□□□ -2.05
SMC4-219ENST00000487747 BCL2L1Q07817 233 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 EIF4EBP1Q13541 118 aaPredicted RBP2.25□□□□□ -2.05
SMC4-219ENST00000487747 GPNMBQ14956 572 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 HKDC1Q2TB90 917 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 CYB5R2Q6BCY4 276 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 RTL6Q6ICC9 239 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 GLRX5Q86SX6 157 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 ERICH1Q86X53 443 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 KIR2DL5AQ8N109 375 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 NUP93Q8N1F7 819 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 ARIH2OSQ8N7S6 290 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 MARCH1Q8TCQ1 289 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 HAS2Q92819 552 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 MR1Q95460 341 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 GBP5Q96PP8 586 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 GLIPR2Q9H4G4 154 aa2.25□□□□□ -2.05
SMC4-219ENST00000487747 ALG9Q9H6U8 611 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms