RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 HNRNPCL2B2RXH8 293 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 HNRNPCL3B7ZW38 293 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 DSCR3O14972 297 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 E2F6O75461 281 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 BMP10O95393 424 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 H6PDO95479 791 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 CBX7O95931 251 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 HNRNPCL4P0DMR1 293 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 ACP2P11117 423 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 S1PR1P21453 382 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 NT5EP21589 574 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 OR1E2P47887 323 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 KCNJ5P48544 419 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 BTG2P78543 158 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 MAP4K2Q12851 820 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 PPP1R8Q12972 351 aaKnown RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 DUSP8Q13202 625 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 DSG2Q14126 1118 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 PUM1Q14671 1186 aaKnown RBP eCLIP8.82□□□□□ -1
SF3B1-211ENST00000487698 PDK3Q15120 406 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 CLPPQ16740 277 aaPredicted RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 OTUD3Q5T2D3 398 aaPredicted RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 PRAMEF17Q5VTA0 474 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 OLIG3Q7RTU3 272 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 WDR53Q7Z5U6 358 aaPredicted RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 HIPK1Q86Z02 1210 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 IFI44Q8TCB0 444 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 ADAMTS15Q8TE58 950 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 RASSF5Q8WWW0 418 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 COL21A1Q96P44 957 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 OR1F2PQ96R84 312 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 ZNF300Q96RE9 604 aaPredicted RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 ADI1Q9BV57 179 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 GTPBP2Q9BX10 602 aaKnown RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 ANKRD60Q9BZ19 345 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 SLC38A1Q9H2H9 487 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 UBAP1Q9NZ09 502 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 IFT80Q9P2H3 777 aaPredicted RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 DHCR7Q9UBM7 475 aaKnown RBP8.82□□□□□ -1
SF3B1-211ENST00000487698 SERTAD3Q9UJW9 196 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 BAG5Q9UL15 447 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 U3KQV3 271 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 SPEGQ15772 3267 aa8.82□□□□□ -1
SF3B1-211ENST00000487698 CLDN4O14493 209 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SERPINB7O75635 380 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 CDC123O75794 336 aaPredicted RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 DNAJB5O75953 348 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ZIC2O95409 532 aaPredicted RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 AGR2O95994 175 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 FESP07332 822 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 FPR1P21462 350 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 DNAJA1P31689 397 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 STT3AP46977 705 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 KCNC4Q03721 635 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ERV3-1Q14264 604 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 EXOSC7Q15024 291 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 DUSP5Q16690 384 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SLC36A3Q495N2 470 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 CYP27C1Q4G0S4 372 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 PLA2G2CQ5R387 149 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 TCEAL6Q6IPX3 200 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ZCCHC12Q6PEW1 402 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ZC3H14Q6PJT7 736 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 UGT2A3Q6UWM9 527 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 DBX2Q6ZNG2 339 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ZNF605Q86T29 641 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 KRT73Q86Y46 540 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 GALNT12Q8IXK2 581 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 VWA5B2Q8N398 1253 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 CDS1Q92903 461 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 TCEAL3Q969E4 200 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SDCCAG3Q96C92 435 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 NRBF2Q96F24 287 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 CCDC74BQ96LY2 380 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 RDH12Q96NR8 316 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ZNF347Q96SE7 839 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 EPYCQ99645 322 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 BARD1Q99728 777 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 RBM4BQ9BQ04 359 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 NDC1Q9BTX1 674 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 RBM4Q9BWF3 364 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 ALOXE3Q9BYJ1 711 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 AMBRA1Q9C0C7 1298 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ARRDC1-AS1Q9H2J1 176 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 PIGUQ9H490 435 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 FANCEQ9HB96 536 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ADAP2Q9NPF8 381 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 DUSP22Q9NRW4 184 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SIDT1Q9NXL6 827 aaKnown RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 CALML5Q9NZT1 146 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SEC14L3Q9UDX4 400 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 CDC14AQ9UNH5 594 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 SH3GLB1Q9Y371 365 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 MAU2Q9Y6X3 613 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 ENPP4Q9Y6X5 453 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 IGKV3D-11A0A0A0MRZ8 115 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 A0A1B0GX78 115 aa8.81□□□□□ -1
SF3B1-211ENST00000487698 NTN3O00634 580 aaPredicted RBP8.81□□□□□ -1
SF3B1-211ENST00000487698 OR10H2O60403 315 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms