RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ZNF701Q9NV72 531 aaPredicted RBP3.95□□□□□ -1.78
CNN3-206ENST00000487539 HIF1ANQ9NWT6 349 aa3.95□□□□□ -1.78
CNN3-206ENST00000487539 PLCL2Q9UPR0 1127 aa3.95□□□□□ -1.78
CNN3-206ENST00000487539 NCKAP5O14513 1909 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 TRBV5-7A0A0A0MS05 114 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 TCRBV7S3A2A0A539 114 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 GTPBP10A4D1E9 387 aaKnown RBP3.94□□□□□ -1.78
CNN3-206ENST00000487539 ARHGAP42A6NI28 874 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 FAM90A20PA6NIJ5 464 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 NPIPB13A6NJU9 1138 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 SAC3D1A6NKF1 404 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 NPIPB5A8MRT5 1133 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 NPIPB4C9JG80 1138 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 CETN3O15182 167 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 SLC4A1P02730 911 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 T-ENOLP0DO92 83 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 CYP4B1P13584 511 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 TNNT1P13805 278 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 PAX1P15863 534 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 CXCR2P25025 360 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 TYK2P29597 1187 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 CCKARP32238 428 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 CDKN2AP42771 156 aaKnown RBP3.94□□□□□ -1.78
CNN3-206ENST00000487539 RFX2P48378 723 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 ENTPD1P49961 510 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 ZNF136P52737 540 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 NIPAL4Q0D2K0 466 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 TIGD6Q17RP2 521 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 HYAL4Q2M3T9 481 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 WASHC2DQ5SRD0 308 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 RIPPLY2Q5TAB7 128 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 LIPNQ5VXI9 398 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 TTI2Q6NXR4 508 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 AADACL2Q6P093 401 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 SCYL2Q6P3W7 929 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 ARHGAP11AQ6P4F7 1023 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 TMEM205Q6UW68 189 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 DET1Q7L5Y6 550 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 SLFN11Q7Z7L1 901 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 LIX1Q8N485 282 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 KIF2BQ8N4N8 673 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 C2orf73Q8N5S3 287 aaPredicted RBP3.94□□□□□ -1.78
CNN3-206ENST00000487539 TMEM217Q8N7C4 229 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 LINC00301Q8NCQ3 95 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 C7orf57Q8NEG2 295 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 GABPB2Q8TAK5 448 aaPredicted RBP3.94□□□□□ -1.78
CNN3-206ENST00000487539 FAM172AQ8WUF8 416 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 SMPDL3BQ92485 455 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 PIK3IP1Q96FE7 263 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 FRG2BQ96QU4 278 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 SMC6Q96SB8 1091 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 MGME1Q9BQP7 344 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 IFT27Q9BW83 186 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 CADM1Q9BY67 442 aaKnown RBP3.94□□□□□ -1.78
CNN3-206ENST00000487539 KCNK13Q9HB14 408 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 Q9N2J8 555 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 BPIFA1Q9NP55 256 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 NT5MQ9NPB1 228 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 KRCC1Q9NPI7 259 aaPredicted RBP3.94□□□□□ -1.78
CNN3-206ENST00000487539 ETNK2Q9NVF9 386 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 GRHPRQ9UBQ7 328 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 NXT1Q9UKK6 140 aaKnown RBP3.94□□□□□ -1.78
CNN3-206ENST00000487539 FZD10Q9ULW2 581 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 PLAGL1Q9UM63 463 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 ICKQ9UPZ9 632 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 HERC2O95714 4834 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 FREM3P0C091 2139 aa3.94□□□□□ -1.78
CNN3-206ENST00000487539 IGLV3-12A0A075B6K2 115 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 IGHV4-30-2A0A087WSY4 118 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 A0A1W2PQ67 120 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 HYKKA2RU49 373 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 C2orf74A8MZ97 194 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 G3V3Y1 287 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 TNFRSF13BO14836 293 aaPredicted RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 HEXBP07686 556 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 ERCC2P18074 760 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 MAGP20916 626 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 PDHA2P29803 388 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 CEACAM8P31997 349 aaPredicted RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 PEX19P40855 299 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 PRCPP42785 496 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 COMPP49747 757 aaPredicted RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 PPIAP62937 165 aaKnown RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 MAT1AQ00266 395 aaKnown RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 ROR2Q01974 943 aaKnown RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 KRT33BQ14525 404 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 RFTN1Q14699 578 aaPredicted RBP3.93□□□□□ -1.78
CNN3-206ENST00000487539 MEP1AQ16819 746 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 TMEM249Q2WGJ8 235 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 RUNDC3AQ59EK9 446 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 FAM120AOSQ5T036 256 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 FNBP1LQ5T0N5 605 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 TAF3Q5VWG9 929 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 FRMPD2BQ6IN97 320 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 FIGLAQ6QHK4 219 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 DNM1P46Q6ZS02 220 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 SLC16A12Q6ZSM3 486 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 ABHD13Q7L211 337 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 AMIGO1Q86WK6 493 aa3.93□□□□□ -1.78
CNN3-206ENST00000487539 GPSM1Q86YR5 675 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms