RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ASPNQ9BXN1 380 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 GIMAP4Q9NUV9 329 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 NDUFB11Q9NX14 153 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 OR6C2Q9NZP2 312 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 STUB1Q9UNE7 303 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 SLC9A8Q9Y2E8 581 aa24.58■■□□□ 1.53
HLA-C-208ENST00000487245 A0A1W2PR48 441 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 LINC01565O15544 149 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 DLGAP3O95886 979 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 ALOX12P18054 663 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 TARDBPQ13148 414 aaKnown RBP eCLIP24.58■■□□□ 1.52
HLA-C-208ENST00000487245 WASH2PQ6VEQ5 465 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 SLC34A3Q8N130 599 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 TMEM145Q8NBT3 493 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 MRPL38Q96DV4 380 aaKnown RBP24.58■■□□□ 1.52
HLA-C-208ENST00000487245 SLC30A2Q9BRI3 323 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 RPP25Q9BUL9 199 aaKnown RBP24.58■■□□□ 1.52
HLA-C-208ENST00000487245 SMURF1Q9HCE7 757 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 SACM1LQ9NTJ5 587 aa24.58■■□□□ 1.52
HLA-C-208ENST00000487245 LYARQ9NX58 379 aaKnown RBP24.58■■□□□ 1.52
HLA-C-208ENST00000487245 DIMT1Q9UNQ2 313 aaKnown RBP24.58■■□□□ 1.52
HLA-C-208ENST00000487245 MYO10Q9HD67 2058 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 PRSS38A1L453 326 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 NME6O75414 186 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-208ENST00000487245 EIF2S1P05198 315 aaKnown RBP24.57■■□□□ 1.52
HLA-C-208ENST00000487245 CSNK2A2P19784 350 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-208ENST00000487245 PEBP1P30086 187 aaKnown RBP24.57■■□□□ 1.52
HLA-C-208ENST00000487245 FEN1P39748 380 aaKnown RBP24.57■■□□□ 1.52
HLA-C-208ENST00000487245 CRYBB2P43320 205 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 ENTPD8Q5MY95 495 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 FBXL6Q8N531 539 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 TCEANCQ8N8B7 351 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 FGF11Q92914 225 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 ABHD8Q96I13 439 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 SDHCQ99643 169 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-208ENST00000487245 NKX2-4Q9H2Z4 354 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 KLHL3Q9UH77 587 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 CLEC2DQ9UHP7 191 aa24.57■■□□□ 1.52
HLA-C-208ENST00000487245 A0A0G2JPF8 293 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 HNRNPCL2B2RXH8 293 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 HNRNPCL3B7ZW38 293 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 ZNF670-ZNF695F2Z2N8 137 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 ERAL1O75616 437 aaKnown RBP24.56■■□□□ 1.52
HLA-C-208ENST00000487245 FHP07954 510 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 HNRNPCL4P0DMR1 293 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 SPNP16150 400 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 PSMA1P25786 263 aaKnown RBP24.56■■□□□ 1.52
HLA-C-208ENST00000487245 MAT2AP31153 395 aaKnown RBP24.56■■□□□ 1.52
HLA-C-208ENST00000487245 PCYT1AP49585 367 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 DGKEP52429 567 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 EFNB1P98172 346 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 HYAL1Q12794 435 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 C1orf94Q6P1W5 598 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 NR4A3Q92570 626 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 PRRC1Q96M27 445 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 FNDC11Q9BVV2 318 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 FGF22Q9HCT0 170 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 MAN2C1Q9NTJ4 1040 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 SPHK1Q9NYA1 384 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 NCKAP1Q9Y2A7 1128 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 ATG4BQ9Y4P1 393 aa24.56■■□□□ 1.52
HLA-C-208ENST00000487245 HYKKA2RU49 373 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 ISM1B1AKI9 464 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 SNPHO15079 494 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 CASC3O15234 703 aaKnown RBP24.55■■□□□ 1.52
HLA-C-208ENST00000487245 SLC31A1O15431 190 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 LGI1O95970 557 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 ACADMP11310 421 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 CDK5Q00535 292 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 FOXD4Q12950 439 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-208ENST00000487245 PIN1Q13526 163 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-208ENST00000487245 SLC48A1Q6P1K1 146 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 WDR53Q7Z5U6 358 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-208ENST00000487245 COMTD1Q86VU5 262 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 FAM20CQ8IXL6 584 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 MORN4Q8NDC4 146 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 OR5D16Q8NGK9 328 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 SUN3Q8TAQ9 357 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 WDFY2Q96P53 400 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 MRPS18AQ9NVS2 196 aaKnown RBP24.55■■□□□ 1.52
HLA-C-208ENST00000487245 CES1P1Q9UKY3 287 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 SLC35F4A4IF30 521 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 PGRMC2O15173 223 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 EMC8O43402 210 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 TPST2O60704 377 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 AIFM1O95831 613 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 CKMT1AP12532 417 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 GSTM3P21266 225 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 MPIP34949 423 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 PRR5P85299 388 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 C1DQ13901 141 aaKnown RBP24.55■■□□□ 1.52
HLA-C-208ENST00000487245 MTSS1LQ765P7 747 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 GDPD3Q7L5L3 318 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 ZER1Q7Z7L7 766 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 AMIGO1Q86WK6 493 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 OR4K5Q8NGD3 323 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 OR9Q1Q8NGQ5 310 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 SETD6Q8TBK2 473 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 LCN9Q8WX39 176 aa24.55■■□□□ 1.52
HLA-C-208ENST00000487245 CEP19Q96LK0 163 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms