RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 GDE1Q9NZC3 331 aa11.6□□□□□ -0.55
PTCD2-204ENST00000486995 CRNNQ9UBG3 495 aaPredicted RBP11.6□□□□□ -0.55
PTCD2-204ENST00000486995 STUB1Q9UNE7 303 aa11.6□□□□□ -0.55
PTCD2-204ENST00000486995 DIMT1Q9UNQ2 313 aaKnown RBP11.6□□□□□ -0.55
PTCD2-204ENST00000486995 SLC17A4Q9Y2C5 497 aa11.6□□□□□ -0.55
PTCD2-204ENST00000486995 KLHL20Q9Y2M5 609 aa11.6□□□□□ -0.55
PTCD2-204ENST00000486995 MYO10Q9HD67 2058 aa11.6□□□□□ -0.55
PTCD2-204ENST00000486995 MN1Q10571 1320 aaPredicted RBP11.6□□□□□ -0.55
PTCD2-204ENST00000486995 TTC36A6NLP5 189 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 CASC3O15234 703 aaKnown RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 FHP07954 510 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 CERS1P27544 350 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 AHRP35869 848 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 GAS1P54826 345 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 TPTEP56180 551 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 FLYWCH1Q4VC44 716 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 GPAT3Q53EU6 434 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 LIPKQ5VXJ0 399 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 KIAA1211LQ6NV74 962 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 SLC48A1Q6P1K1 146 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 MEX3DQ86XN8 651 aaKnown RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 TMEM145Q8NBT3 493 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 TXNDC15Q96J42 360 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 SARGQ9BW04 601 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 C1QTNF2Q9BXJ5 285 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 PINK1Q9BXM7 581 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ANKRA2Q9H9E1 313 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 SMURF1Q9HCE7 757 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 PRKAG2Q9UGJ0 569 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 C2orf16Q68DN1 1984 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 A0A087WUU8 490 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 HYKKA2RU49 373 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 PRR23AA6NEV1 266 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 PDZK1P1A8MUH7 402 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ZNF670-ZNF695F2Z2N8 137 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 MYL12BO14950 172 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ADH1BP00325 375 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 F3P13726 295 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ETV5P41161 510 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ETV1P50549 477 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ANXA11P50995 505 aaKnown RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 RAB8AP61006 207 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ABATP80404 500 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 GPM6BQ13491 265 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 GNA13Q14344 377 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 CARTPTQ16568 116 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 CCBE1Q6UXH8 406 aaPredicted RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 NCCRP1Q6ZVX7 275 aaPredicted RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 TRIM69Q86WT6 500 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 OR56A1Q8NGH5 318 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 CEP19Q96LK0 163 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 TRMT61BQ9BVS5 477 aaKnown RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 EGLN3Q9H6Z9 239 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 C14orf119Q9NWQ9 140 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 ERVK13-1Q9NX77 482 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 APOBEC3BQ9UH17 382 aaKnown RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 KLHL3Q9UH77 587 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 GPR55Q9Y2T6 319 aaPredicted RBP11.59□□□□□ -0.55
PTCD2-204ENST00000486995 GPSM3Q9Y4H4 160 aa11.59□□□□□ -0.55
PTCD2-204ENST00000486995 SNPHO15079 494 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 SCAMP1O15126 338 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 PROM1O43490 865 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 GUCY1B2O75343 617 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 RAB36O95755 333 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 ACADMP11310 421 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 CSNK2A2P19784 350 aaPredicted RBP11.58□□□□□ -0.55
PTCD2-204ENST00000486995 TIE1P35590 1138 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 RORCP51449 518 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 SGCGQ13326 291 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 SNAPC1Q16533 368 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 PRAMEF8Q5VWM4 474 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 PRAMEF7Q5VXH5 474 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 USP30Q70CQ3 517 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 FLCNQ8NFG4 579 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 ZNF681Q96N22 645 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 OR7D2Q96RA2 312 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 SLC38A1Q9H2H9 487 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 SFXN1Q9H9B4 322 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 SIAEQ9HAT2 523 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 POLMQ9NP87 494 aaPredicted RBP11.58□□□□□ -0.55
PTCD2-204ENST00000486995 SNTG1Q9NSN8 517 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 MOSPD1Q9UJG1 213 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 ENTPD4Q9Y227 616 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 TRAPPC4Q9Y296 219 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 CHST2Q9Y4C5 530 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.55
PTCD2-204ENST00000486995 UNC80Q8N2C7 3258 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 GOLGA4Q13439 2230 aaKnown RBP11.58□□□□□ -0.56
PTCD2-204ENST00000486995 GRXCR1A8MXD5 290 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 EMC8O43402 210 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 GSTM3P21266 225 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 MC3RP41968 323 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 SOX9P48436 509 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 TGM4P49221 684 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 SMSP52788 366 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 ARFIP1P53367 373 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 RPS21P63220 83 aaKnown RBP11.58□□□□□ -0.56
PTCD2-204ENST00000486995 CHRNEQ04844 493 aa11.58□□□□□ -0.56
PTCD2-204ENST00000486995 C1DQ13901 141 aaKnown RBP11.58□□□□□ -0.56
PTCD2-204ENST00000486995 LRRC32Q14392 662 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms