RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 GABRG3Q99928 467 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 NEURL2Q9BR09 285 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 GIMAP4Q9NUV9 329 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TRNAU1APQ9NX07 287 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 KLHL20Q9Y2M5 609 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 LSM2Q9Y333 95 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 EYSQ5T1H1 3165 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 A0A1W2PS29 197 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 SLC31A1O15431 190 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 LINC01565O15544 149 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 PROM1O43490 865 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TPST2O60704 377 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 CHRM5P08912 532 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TNNI3P19429 210 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 MPIP34949 423 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 ZNF91Q05481 1191 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 DOC2BQ14184 412 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 SSX1Q16384 188 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 ZER1Q7Z7L7 766 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 HMGN2P46Q86SG4 172 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 TCEANCQ8N8B7 351 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 MORN4Q8NDC4 146 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 SLC6A18Q96N87 628 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 OPALINQ96PE5 141 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 RACGAP1Q9H0H5 632 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 LYARQ9NX58 379 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 MKLN1Q9UL63 735 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 KCNE3Q9Y6H6 103 aa16.92■□□□□ 0.3
PDLIM7-207ENST00000486828 MYO10Q9HD67 2058 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 UPK1BO75841 260 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 SCG5P05408 212 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 ASGR2P07307 311 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 LAMP2P13473 410 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 TGM3Q08188 693 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 TPRG1LQ5T0D9 272 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 RNLSQ5VYX0 342 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 ANKRD54Q6NXT1 300 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 C1orf94Q6P1W5 598 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 TMEM184AQ6ZMB5 413 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 IQCHQ86VS3 1027 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 AMIGO1Q86WK6 493 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 FAM26EQ8N5C1 309 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 IL17RCQ8NAC3 791 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 ZNF681Q96N22 645 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 OR7D2Q96RA2 312 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 POLDIP3Q9BY77 421 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 C3orf14Q9HBI5 128 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 TVP23BQ9NYZ1 205 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 TBC1D29Q9UFV1 150 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 XIRP2A4UGR9 3374 aa16.91■□□□□ 0.3
PDLIM7-207ENST00000486828 SAGE2PA6NJ88 616 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 SYT5O00445 386 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 ASNA1O43681 348 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 KIAA0513O60268 411 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 S100A5P33763 92 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 MC3RP41968 323 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 PPP2CBP62714 309 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 PPP2CAP67775 309 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 TJAP1Q5JTD0 557 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 ENTPD8Q5MY95 495 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 SLC25A30Q5SVS4 291 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 SDE2Q6IQ49 451 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 PAQR7Q86WK9 346 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 IQCF1Q8N6M8 205 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 NUP43Q8NFH3 380 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 OR4E2Q8NGC2 313 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 OR9A2Q8NGT5 310 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 LCN9Q8WX39 176 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 ELP4Q96EB1 424 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 TSSK6Q9BXA6 273 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 FBRSQ9HAH7 460 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 ISPDA4D126 451 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 HOXC4P09017 264 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 NDUFS1P28331 727 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 PCYT1AP49585 367 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 KIAA1024LP59773 190 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 PRKCDQ05655 676 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 DNASE1L3Q13609 305 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 NRROSQ86YC3 692 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 SLC34A3Q8N130 599 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 CYP4Z2PQ8N1L4 340 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 ASB12Q8WXK4 309 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 NR4A3Q92570 626 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 GAL3ST3Q96A11 431 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 TRNT1Q96Q11 434 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 MND1Q9BWT6 205 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 SLC38A1Q9H2H9 487 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 HHATLQ9HCP6 504 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 CALML5Q9NZT1 146 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 KLF15Q9UIH9 416 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 CFL2Q9Y281 166 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 ZNF780BQ9Y6R6 833 aa16.9■□□□□ 0.3
PDLIM7-207ENST00000486828 POM121BA6NF01 834 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 PRKYO43930 277 aa16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 CSO75390 466 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 SNRNP200O75643 2136 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-207ENST00000486828 EML2O95834 649 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms