RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CHRDQ9H2X0 955 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 SEMA6CQ9H3T2 930 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 PLCXD1Q9NUJ7 323 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 GIN1Q9NXP7 522 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 PTGFRNQ9P2B2 879 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 A4GNTQ9UNA3 340 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 MRPS2Q9Y399 296 aaKnown RBP19.11■□□□□ 0.65
HPS3-206ENST00000486530 KCNE3Q9Y6H6 103 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 DSPPQ9NZW4 1301 aa19.11■□□□□ 0.65
HPS3-206ENST00000486530 SYT5O00445 386 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 CPMP14384 443 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 CD27P26842 260 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 IDH2P48735 452 aaKnown RBP19.1■□□□□ 0.65
HPS3-206ENST00000486530 FAM111BQ6SJ93 734 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 OLIG3Q7RTU3 272 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 C16orf62Q7Z3J2 963 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 COMTD1Q86VU5 262 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 OR2L13Q8N349 312 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 RORBQ92753 470 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 COL26A1Q96A83 441 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 CCDC3Q9BQI4 270 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 SLC38A1Q9H2H9 487 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 ANKRA2Q9H9E1 313 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 FTSJ1Q9UET6 329 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 WARS2Q9UGM6 360 aaKnown RBP19.1■□□□□ 0.65
HPS3-206ENST00000486530 TMEM131Q92545 1883 aa19.1■□□□□ 0.65
HPS3-206ENST00000486530 A0A1W2PRQ8 180 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 ZNF860A6NHJ4 632 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 MT-ND2P03891 347 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 ALPPP05187 535 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 PORP16435 677 aaPredicted RBP19.09■□□□□ 0.65
HPS3-206ENST00000486530 CCNA2P20248 432 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 GP2P55259 537 aaKnown RBP19.09■□□□□ 0.65
HPS3-206ENST00000486530 PPP1CAP62136 330 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 OLR1P78380 273 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 DGCR6Q14129 220 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 ELOCQ15369 112 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 MFSD12Q6NUT3 480 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 CDC73Q6P1J9 531 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 ADAMTS15Q8TE58 950 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 WFDC6Q9BQY6 131 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 FUZQ9BT04 418 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 DCUN1D5Q9BTE7 237 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 IMPAD1Q9NX62 359 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 ZAR1LA6NP61 321 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 GALR3O60755 368 aaPredicted RBP19.09■□□□□ 0.65
HPS3-206ENST00000486530 DNAJB6O75190 326 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 INMTO95050 263 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 EPPINO95925 133 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 TYRP1P17643 537 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 CRISP1P54107 249 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 UGT2B15P54855 530 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 CDC42P60953 191 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 HPCAP84074 193 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 PTGES3Q15185 160 aaKnown RBP19.09■□□□□ 0.65
HPS3-206ENST00000486530 SEC23BQ15437 767 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 FAM214AQ32MH5 1076 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 HEPHL1Q6MZM0 1159 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 CLDN23Q96B33 292 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 PRRC1Q96M27 445 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 SIGLEC11Q96RL6 698 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 RHNO1Q9BSD3 238 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 FNDC11Q9BVV2 318 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 UCK2Q9BZX2 261 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 PCED1AQ9H1Q7 454 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 TRIM45Q9H8W5 580 aaPredicted RBP19.09■□□□□ 0.65
HPS3-206ENST00000486530 GPN2Q9H9Y4 310 aaPredicted RBP19.09■□□□□ 0.65
HPS3-206ENST00000486530 TBC1D17Q9HA65 648 aa19.09■□□□□ 0.65
HPS3-206ENST00000486530 C19orf67A6NJJ6 358 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 METTL12A8MUP2 240 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 FAM227AF5H4B4 570 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 OR10H3O60404 316 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 CSF2P04141 144 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 GABRB1P18505 474 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 CHMP24386 653 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 CD38P28907 300 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 VSX2P58304 361 aaPredicted RBP19.08■□□□□ 0.65
HPS3-206ENST00000486530 FOXD4Q12950 439 aaPredicted RBP19.08■□□□□ 0.65
HPS3-206ENST00000486530 C6orf132Q5T0Z8 1188 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 KLHL35Q6PF15 583 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 DHRS4L2Q6PKH6 230 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 AHSA2Q719I0 299 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 PRSS41Q7RTY9 318 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 OR4N5Q8IXE1 308 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 SPEM1Q8N4L4 309 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 LINC00471Q8N535 108 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 OR6T1Q8NGN1 323 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 TMEM74BQ9NUR3 256 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 ZNF226Q9NYT6 803 aa19.08■□□□□ 0.65
HPS3-206ENST00000486530 SH3PXD2BA1X283 911 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 MPZL2O60487 215 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 SLITRK5O94991 958 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 WNT1P04628 370 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 OSMP13725 252 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 NME1P15531 152 aaKnown RBP19.07■□□□□ 0.64
HPS3-206ENST00000486530 ST6GAL1P15907 406 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 MASP1P48740 699 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 CHRNEQ04844 493 aa19.07■□□□□ 0.64
HPS3-206ENST00000486530 PIN1Q13526 163 aaPredicted RBP19.07■□□□□ 0.64
HPS3-206ENST00000486530 ZNF628Q5EBL2 1059 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms