RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 EMX2Q04743 252 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 MRPL49Q13405 166 aaKnown RBP11.49□□□□□ -0.57
HMG20B-211ENST00000486028 TTMPQ5BVD1 217 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 SWT1Q5T5J6 900 aaKnown RBP11.49□□□□□ -0.57
HMG20B-211ENST00000486028 IL23RQ5VWK5 629 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 SLC22A10Q63ZE4 541 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 LIX1Q8N485 282 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 PSD4Q8NDX1 1056 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 ZFP28Q8NHY6 868 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 SPACA9Q96E40 222 aaPredicted RBP11.49□□□□□ -0.57
HMG20B-211ENST00000486028 PPP1R36Q96LQ0 422 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 FRMD6Q96NE9 622 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 AMDHD1Q96NU7 426 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 PRPF18Q99633 342 aaKnown RBP11.49□□□□□ -0.57
HMG20B-211ENST00000486028 AKTIPQ9H8T0 292 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 PNPOQ9NVS9 261 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 NPFFR2Q9Y5X5 522 aa11.49□□□□□ -0.57
HMG20B-211ENST00000486028 POLEQ07864 2286 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 A0A087WV62 115 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 SLCO1B7G3V0H7 640 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 PLOD2O00469 737 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 ACOX3O15254 700 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 PDPK1O15530 556 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 COQ9O75208 318 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 SNNO75324 88 aaPredicted RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 ZNF24P17028 368 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 PRPS1L1P21108 318 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 MST1P26927 711 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 SOX18P35713 384 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 PPICP45877 212 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 TMED10P49755 219 aaKnown RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 MEOX1P50221 254 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 DUSP8Q13202 625 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 PDE7AQ13946 482 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 EIF2S3LQ2VIR3 472 aaKnown RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 KRTCAP3Q53RY4 240 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 ANKRD26P1Q6NSI1 321 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 LYPD8Q6UX82 237 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 TMEM64Q6YI46 380 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 CPSF7Q8N684 471 aaKnown RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 FAM13CQ8NE31 585 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 OR2M7Q8NG81 312 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 OR7G2Q8NG99 324 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 ZNF75CPQ92670 426 aaPredicted RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 ZBED6CLQ96FA7 236 aaPredicted RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 LCORQ96JN0 433 aaPredicted RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 FAM173AQ9BQD7 235 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 C1orf50Q9BV19 199 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 ITPAQ9BY32 194 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 NUF2Q9BZD4 464 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 NXF5Q9H1B4 397 aaKnown RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 GLIPR2Q9H4G4 154 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 SACM1LQ9NTJ5 587 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 TAS2R9Q9NYW1 312 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 NOP53Q9NZM5 478 aaKnown RBP11.48□□□□□ -0.57
HMG20B-211ENST00000486028 CNIH4Q9P003 139 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 SEC14L3Q9UDX4 400 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 ATP6V1HQ9UI12 483 aa11.48□□□□□ -0.57
HMG20B-211ENST00000486028 TRPC5OSA6NMA1 111 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 NPIPA5E9PKD4 350 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 TP53I11O14683 189 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 KLF11O14901 512 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 HDAC3O15379 428 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 IFI6P09912 130 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 NAGAP17050 411 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 LBPP18428 481 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 GPC1P35052 558 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 TDGF1P3P51864 188 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 MANFP55145 182 aaKnown RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 GPR85P60893 370 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 PSPHP78330 225 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 RPP38P78345 283 aaKnown RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 OCRLQ01968 901 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 NTRK2Q16620 822 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 CPTPQ5TA50 214 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 FHL5Q5TD97 284 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 TMEM107Q6UX40 140 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 GFRALQ6UXV0 394 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 GK5Q6ZS86 529 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 FAM47EQ6ZV65 393 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 ZNF551Q7Z340 670 aaPredicted RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 LRRC34Q8IZ02 419 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 NATD1Q8N6N6 113 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 ZFP62Q8NB50 900 aaPredicted RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 SIMC1Q8NDZ2 872 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 OR10G3Q8NGC4 313 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 OR5M3Q8NGP4 307 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 PAQR8Q8TEZ7 354 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 CIDECQ96AQ7 238 aaPredicted RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 ELP4Q96EB1 424 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 HSPBAP1Q96EW2 488 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 ANKRA2Q9H9E1 313 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 MEAF6Q9HAF1 191 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 SH2D2AQ9NP31 389 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 ACSS1Q9NUB1 689 aaPredicted RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 ATAD3AQ9NVI7 634 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 DDX18Q9NVP1 670 aaKnown RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 ASIC5Q9NY37 505 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 NPIPA1Q9UND3 350 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 C19orf53Q9UNZ5 99 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms