RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	SDR39U1	Q9NRG7	319 aa	Predicted RBP	12.82	□□□□□ -0.36
SCAP-211	ENST00000485967	KLHL14	Q9P2G3	628 aa		12.82	□□□□□ -0.36
SCAP-211	ENST00000485967	SNX8	Q9Y5X2	465 aa		12.82	□□□□□ -0.36
SCAP-211	ENST00000485967	PRSS51	A0A1B0GVH4	220 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967		C9JVG2	144 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	EMC8	O43402	210 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	CPSF4	O95639	269 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	C6orf47	O95873	294 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	CLPS	P04118	112 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	IL6	P05231	212 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	LSP1	P33241	339 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	ST13	P50502	369 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	CDK9	P50750	372 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	NR0B1	P51843	470 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	POLR2J	P52435	117 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	DGKQ	P52824	942 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	SEC24C	P53992	1094 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	DCAF7	P61962	342 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	TLE1	Q04724	770 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	EBP	Q15125	230 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	PIGG	Q5H8A4	983 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	METTL21C	Q5VZV1	264 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	PAOX	Q6QHF9	649 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	PTRH1	Q86Y79	214 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	TAGAP	Q8N103	731 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	HORMAD2	Q8N7B1	307 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	TP53INP1	Q96A56	240 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	OR52E6	Q96RD3	313 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	RNF32	Q9H0A6	362 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	ANKRD10	Q9NXR5	420 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	ERVK-11	Q9UQG0	969 aa		12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	UTP20	O75691	2785 aa	Known RBP	12.81	□□□□□ -0.36
SCAP-211	ENST00000485967	FAM234B	A2RU67	622 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	OR5H15	A6NDH6	313 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	TMEM200C	A6NKL6	621 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967		A8MVJ9	347 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	UPK1A	O00322	258 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	RNASET2	O00584	256 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	CDK2AP1	O14519	115 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	PGR	P06401	933 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	GPX3	P22352	226 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	IL12A	P29459	219 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	SOAT1	P35610	550 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	CD96	P40200	585 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	CYB561	P49447	251 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	EMD	P50402	254 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	ATP4B	P51164	291 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	NRG3	P56975	720 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	PRR5	P85299	388 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	ZNF155	Q12901	538 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	KLRB1	Q12918	225 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	TUBA3C	Q13748	450 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	SQLE	Q14534	574 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	ZNHIT3	Q15649	155 aa	Predicted RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	AGK	Q53H12	422 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	FHL5	Q5TD97	284 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	CGB2	Q6NT52	195 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	TUBA3E	Q6PEY2	450 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	OPN5	Q6U736	354 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	IL20RB	Q6UXL0	311 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	ANKRD46	Q86W74	232 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	ARMC10	Q8N2F6	343 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	OR2L13	Q8N349	312 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	SLC15A4	Q8N697	577 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	SIMC1	Q8NDZ2	872 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	CATSPER1	Q8NEC5	780 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	NUP43	Q8NFH3	380 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	OR4A15	Q8NGL6	344 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	RASL10B	Q96S79	203 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	ELAC2	Q9BQ52	826 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	ITPA	Q9BY32	194 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	HPF1	Q9NWY4	346 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	FAM120C	Q9NX05	1096 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	LRFN1	Q9P244	771 aa		12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	COPG1	Q9Y678	874 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	PRRC2C	Q9Y520	2896 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.8	□□□□□ -0.36
SCAP-211	ENST00000485967	CNTRL	Q7Z7A1	2325 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	NOTCH2	Q04721	2471 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	CAPN14	A8MX76	684 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	IFI6	P09912	130 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	SOX18	P35713	384 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	PPIC	P45877	212 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	CCT3	P49368	545 aa	Known RBP	12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	MRPL19	P49406	292 aa	Known RBP	12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	HLCS	P50747	726 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	WNT3	P56703	355 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	KCNK10	P57789	538 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	LRRC74A	Q0VAA2	488 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	DUSP8	Q13202	625 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	TLR1	Q15399	786 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	OR1C1	Q15619	314 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	BHLHB9	Q6PI77	547 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	GPALPP1	Q8IXQ4	340 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	CLECL1	Q8IZS7	167 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	OR9I1	Q8NGQ6	314 aa		12.79	□□□□□ -0.36
SCAP-211	ENST00000485967	ADIPOR1	Q96A54	375 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms