RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 EHD3Q9NZN3 535 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 ZNF639Q9UID6 485 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 TMCO1Q9UM00 188 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 ABCA4P78363 2273 aa17.55■□□□□ 0.4
COL27A1-205ENST00000485397 MPDZO75970 2070 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 MBD3L4A6NDZ8 208 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 MBD3L3A6NE82 208 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 MBD3L5A6NJ08 208 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 CBX7O95931 251 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 INHBAP08476 426 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 RPS17P08708 135 aaKnown RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 NAGAP17050 411 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 DNASE1P24855 282 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 DAZAP2Q15038 168 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 LETMD1Q6P1Q0 360 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 NUP54Q7Z3B4 507 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 C9orf106Q8NAJ2 232 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 CHDHQ8NE62 594 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 OR52R1Q8NGF1 315 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 MBD3L2Q8NHZ7 208 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 LINC01560Q8TB33 94 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 SELENOMQ8WWX9 145 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 LCORQ96JN0 433 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 FUT8Q9BYC5 575 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 CDC42EP4Q9H3Q1 356 aaKnown RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 GALNT9Q9HCQ5 603 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 FOXD3Q9UJU5 478 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 CFL2Q9Y281 166 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 PLLPQ9Y342 182 aa17.54■□□□□ 0.4
COL27A1-205ENST00000485397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL27A1-205ENST00000485397 EXPH5Q8NEV8 1989 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 GOLGA6L10A6NI86 522 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 SNPHO15079 494 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 ICOSLGO75144 302 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 CDH16O75309 829 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 UGT2B11O75310 529 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 GUCY1B2O75343 617 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 ATP1B1P05026 303 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 CSNK2A2P19784 350 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-205ENST00000485397 KLK2P20151 261 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 CTSSP25774 331 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 CNTFP26441 200 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 SLCO1A2P46721 670 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 PLCXD2Q0VAA5 305 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 LTB4RQ15722 352 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 TSNAXIP1Q2TAA8 658 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 TRMT12Q53H54 448 aaKnown RBP17.53■□□□□ 0.4
COL27A1-205ENST00000485397 SLC30A6Q6NXT4 461 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 ZNF483Q8TF39 744 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-205ENST00000485397 KLHL29Q96CT2 875 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 HBEGFQ99075 208 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 PAFAH2Q99487 392 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 OSBPL11Q9BXB4 747 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 CALHM2Q9HA72 323 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 SERHLQ9NQF3 203 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 FETUBQ9UGM5 382 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 ZNF225Q9UK10 706 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 MAPRE3Q9UPY8 281 aa17.53■□□□□ 0.4
COL27A1-205ENST00000485397 TUBAL3A6NHL2 446 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 EEF1E1-BLOC1S5C9J1V9 151 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 EEF1E1O43324 174 aaKnown RBP17.52■□□□□ 0.4
COL27A1-205ENST00000485397 SBK3P0C264 359 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 EPXP11678 715 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 PCSK2P16519 638 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 ALDH9A1P49189 494 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 MRPS35P82673 323 aaKnown RBP17.52■□□□□ 0.4
COL27A1-205ENST00000485397 TMEM81Q6P7N7 255 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 RELL1Q8IUW5 271 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 C1orf52Q8N6N3 182 aaKnown RBP17.52■□□□□ 0.4
COL27A1-205ENST00000485397 RDH11Q8TC12 318 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 CTHRC1Q96CG8 243 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 CNRIP1Q96F85 164 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-205ENST00000485397 POM121Q96HA1 1249 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 ZNF681Q96N22 645 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 MRPL57Q9BQC6 102 aaKnown RBP17.52■□□□□ 0.4
COL27A1-205ENST00000485397 KLRF1Q9NZS2 232 aa17.52■□□□□ 0.4
COL27A1-205ENST00000485397 A8MT66 165 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 TRIM49D1C9J1S8 452 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 POC1B-GALNT4F8VUJ3 575 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 ACOX3O15254 700 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 NME6O75414 186 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-205ENST00000485397 OR4F21O95013 312 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 ACTL6AO96019 429 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 OTCP00480 354 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 COL6A2P12110 1019 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 CYP4B1P13584 511 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 OPRM1P35372 400 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 EMDP50402 254 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 SERPINB9P50453 376 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 DGKQP52824 942 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 PPP2R2AP63151 447 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 SRYQ05066 204 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 CKAP4Q07065 602 aaKnown RBP17.51■□□□□ 0.39
COL27A1-205ENST00000485397 FOXF2Q12947 444 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 FOXD4Q12950 439 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-205ENST00000485397 RCAN2Q14206 197 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 TCHHL1Q5QJ38 904 aaPredicted RBP17.51■□□□□ 0.39
COL27A1-205ENST00000485397 PLXDC2Q6UX71 529 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 KIF18BQ86Y91 864 aa17.51■□□□□ 0.39
COL27A1-205ENST00000485397 TMEM151AQ8N4L1 468 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms