RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RERGQ96A58 199 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 TM4SF18Q96CE8 201 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZBED6CLQ96FA7 236 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF764Q96H86 408 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 PYURFQ96I23 114 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 VPS50Q96JG6 964 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 CIB1Q99828 191 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 C17orf62Q9BQA9 187 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SLC35A5Q9BS91 424 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SORBS1Q9BX66 1292 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 OSBPL11Q9BXB4 747 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 B3GNT4Q9C0J1 378 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 IKZF5Q9H5V7 419 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 DDX31Q9H8H2 851 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 COQ10BQ9H8M1 238 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SLC22A11Q9NSA0 550 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SLC6A13Q9NSD5 602 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 GIMAP4Q9NUV9 329 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 DCAF13Q9NV06 445 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ADPRHL2Q9NX46 363 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 EHD3Q9NZN3 535 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 NDOR1Q9UHB4 597 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 PADI1Q9ULC6 663 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 FAF1Q9UNN5 650 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 USP22Q9UPT9 525 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 MRPS2Q9Y399 296 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 GMEB1Q9Y692 573 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SEC16AO15027 2179 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 COL6A6A6NMZ7 2263 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 C1orf226A1L170 272 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 TMEM247A6NEH6 219 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ARGFXA6NJG6 315 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 SAC3D1A6NKF1 404 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 EIF4E1BA6NMX2 242 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PRKD3O94806 890 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF682O95780 498 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 IFNA14P01570 189 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PDGFAP04085 211 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF23P17027 643 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 EFNA1P20827 205 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 HIST1H1TP22492 207 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ALAS2P22557 587 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 OTX2P32243 289 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 GPC1P35052 558 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 OR1D4P47884 311 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ANXA11P50995 505 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 GZMMP51124 257 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 CLCN2P51788 898 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ARHGDIAP52565 204 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 HBA1P69905 142 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 MC1RQ01726 317 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 SLAMF1Q13291 335 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PDK3Q15120 406 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 RGNQ15493 299 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 NRF1Q16656 503 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 SYT16Q17RD7 645 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ADPRMQ3LIE5 342 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 SPDYE7PQ495Y7 208 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 LRRC23Q53EV4 343 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF385BQ569K4 471 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 GCNT6Q5T4J0 391 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 MLIPQ5VWP3 458 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 HMBOX1Q6NT76 420 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PPP4R4Q6NUP7 873 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ABHD17CQ6PCB6 329 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 BHLHB9Q6PI77 547 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 TTLL10Q6ZVT0 673 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 COX15Q7KZN9 410 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PRSS41Q7RTY9 318 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 MCATQ8IVS2 390 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ZZZ3Q8IYH5 903 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PRSS58Q8IYP2 241 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ZCCHC7Q8N3Z6 543 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 CAMKVQ8NCB2 501 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PNPT1Q8TCS8 783 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 GAL3ST3Q96A11 431 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 CIDECQ96AQ7 238 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 EXOSC8Q96B26 276 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 MS4A6EQ96DS6 147 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 TCTN2Q96GX1 697 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF597Q96LX8 424 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF717Q9BY31 904 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ACSS1Q9NUB1 689 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 LYARQ9NX58 379 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 DNAJB9Q9UBS3 223 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 CTSFQ9UBX1 484 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 PSME2Q9UL46 239 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 EXO1Q9UQ84 846 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ENTPD4Q9Y227 616 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 ANGPT4Q9Y264 503 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 SNX8Q9Y5X2 465 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 AP4B1Q9Y6B7 739 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 SPACA6W5XKT8 324 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 BAHCC1Q9P281 2608 aa6.5□□□□□ -1.37
BRCA1-216ENST00000484087 FASNP49327 2511 aaKnown RBP6.5□□□□□ -1.37
BRCA1-216ENST00000484087 A0A0A6YYD5 115 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 OR2A25A4D2G3 310 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 C5orf58C9J3I9 102 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 SUV39H1O43463 412 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TMPRSS11DO60235 418 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms