RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 PEX11GQ96HA9 241 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ZNF354BQ96LW1 612 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 COL21A1Q96P44 957 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 NUDT22Q9BRQ3 303 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 SLC38A1Q9H2H9 487 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ZNF696Q9H7X3 374 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 PRTFDC1Q9NRG1 225 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 CUTCQ9NTM9 273 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 EXD2Q9NVH0 621 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 SCOCQ9UIL1 159 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 SH3GLB1Q9Y371 365 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 LYVE1Q9Y5Y7 322 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 UNC13CQ8NB66 2214 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 A0A1W2PQM1 296 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 A6NHS1 94 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 PATE3B3GLJ2 98 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 TMEM150CB9EJG8 249 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 CLDN4O14493 209 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ARHGAP33O14559 1287 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 CASC3O15234 703 aaKnown RBP13.13□□□□□ -0.31
CLK3-204ENST00000483723 ZNF749O43361 778 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ALBP02768 609 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 CT62P0C5K7 136 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ANKRD34CP0C6C1 535 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ACP2P11117 423 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 RRM2P31350 389 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 LIMS1P48059 325 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 DAPP51397 102 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 HSD17B7P56937 341 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
CLK3-204ENST00000483723 BIKQ13323 160 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ARHGAP11BQ3KRB8 267 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ATAD3BQ5T9A4 648 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 KDM4DQ6B0I6 523 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 FAHD1Q6P587 224 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 DGAT2L6Q6ZPD8 337 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ARHGAP22Q7Z5H3 698 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 CYP4Z1Q86W10 505 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 ST13P4Q8IZP2 240 aaPredicted RBP13.13□□□□□ -0.31
CLK3-204ENST00000483723 OR51Q1Q8NH59 317 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 OTUB1Q96FW1 271 aaPredicted RBP13.13□□□□□ -0.31
CLK3-204ENST00000483723 STACQ99469 402 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 PIGUQ9H490 435 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 EQTNQ9NQ60 294 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 SEC14L3Q9UDX4 400 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 KCND3Q9UK17 655 aa13.13□□□□□ -0.31
CLK3-204ENST00000483723 MYOCOSA0A1B0GUC4 107 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 CPED1A4D0V7 1026 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 HYAL3O43820 417 aaPredicted RBP13.12□□□□□ -0.31
CLK3-204ENST00000483723 NME6O75414 186 aaPredicted RBP13.12□□□□□ -0.31
CLK3-204ENST00000483723 SOX30O94993 753 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 H6PDO95479 791 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 CER1O95813 267 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 LGI1O95970 557 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 IFNW1P05000 195 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 GNAO1P09471 354 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 GALNSP34059 522 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 CCL7P80098 99 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 SYT16Q17RD7 645 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 CYP27C1Q4G0S4 372 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 TRIM61Q5EBN2 209 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 SNAP47Q5SQN1 464 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 OLIG3Q7RTU3 272 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 TMPRSS9Q7Z410 1059 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 EID2Q8N6I1 236 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 CDRT4Q8N9R6 151 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 CHDHQ8NE62 594 aaPredicted RBP13.12□□□□□ -0.31
CLK3-204ENST00000483723 PROX1Q92786 737 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 NAT6Q93015 286 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 ZNF501Q96CX3 271 aaPredicted RBP13.12□□□□□ -0.31
CLK3-204ENST00000483723 MBOAT4Q96T53 435 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 DPYSL5Q9BPU6 564 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 TOR3AQ9H497 397 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 PNPLA3Q9NST1 481 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 FAM118AQ9NWS6 357 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 IRAK4Q9NWZ3 460 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
CLK3-204ENST00000483723 SERTAD3Q9UJW9 196 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 C3orf18Q9UK00 162 aa13.12□□□□□ -0.31
CLK3-204ENST00000483723 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
CLK3-204ENST00000483723 A8MU76 341 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 A8MVJ9 347 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 E9PQ18 207 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 TNFRSF11BO00300 401 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 SLC16A6O15403 523 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 TNFAIP8O95379 198 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 ZIC2O95409 532 aaPredicted RBP13.11□□□□□ -0.31
CLK3-204ENST00000483723 CPNE6O95741 557 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 EPPINO95925 133 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 CBX7O95931 251 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 SYPP08247 313 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 RAD23AP54725 363 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 BTG2P78543 158 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 CHRNEQ04844 493 aa13.11□□□□□ -0.31
CLK3-204ENST00000483723 DUSP5Q16690 384 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms