RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 DLX4Q92988 240 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-210ENST00000482158 OR4F4Q96R69 305 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 ATG10Q9H0Y0 220 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 RNF41Q9H4P4 317 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-210ENST00000482158 ELL3Q9HB65 397 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-210ENST00000482158 ZNF581Q9P0T4 197 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
SF3B1-210ENST00000482158 PDLIM1O00151 329 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 PPP2R1BP30154 601 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 NUMBP49757 651 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 MFAP2P55001 183 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 SLC8A3P57103 927 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 SLC26A5P58743 744 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 GABPB1Q06547 395 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-210ENST00000482158 LTB4RQ15722 352 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 TOR1AIP1Q5JTV8 583 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 ABRAXAS1Q6UWZ7 409 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 CEACAM19Q7Z692 300 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 RANBP3LQ86VV4 465 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-210ENST00000482158 HIPK1Q86Z02 1210 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 U2AF1L4Q8WU68 220 aaKnown RBP4.42□□□□□ -1.7
SF3B1-210ENST00000482158 ANKRD9Q96BM1 317 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-210ENST00000482158 PSMB7Q99436 277 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 FAM173AQ9BQD7 235 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 PYGO2Q9BRQ0 406 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 APOOQ9BUR5 198 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 TMEM231Q9H6L2 316 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 ABCC13Q9NSE7 274 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 ARMCX1Q9P291 453 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 CIDEBQ9UHD4 219 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 PURGQ9UJV8 347 aaKnown RBP4.42□□□□□ -1.7
SF3B1-210ENST00000482158 RNF24Q9Y225 148 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 CLCA3PQ9Y6N3 262 aa4.42□□□□□ -1.7
SF3B1-210ENST00000482158 NPIPA5A0A0B4J1W7 369 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 ZNF840PA6NDX5 716 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 NPIPA5E9PKD4 350 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 H3BMH7 237 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-210ENST00000482158 EI24O14681 340 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 ZNF253O75346 499 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 SH3BGRLO75368 114 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 GOT2P00505 430 aaKnown RBP4.41□□□□□ -1.7
SF3B1-210ENST00000482158 FAM200BP0CF97 657 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 HSD17B1P14061 328 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 CAMLGP49069 296 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 GSTO1P78417 241 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 ZNF33BQ06732 778 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 SPP2Q13103 211 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 SNX1Q13596 522 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 CEBPEQ15744 281 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 EIPR1Q53HC9 387 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 APOOLQ6UXV4 268 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 GOLGA7Q7Z5G4 137 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 ARFGAP2Q8N6H7 521 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-210ENST00000482158 BEST4Q8NFU0 473 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 WDR36Q8NI36 951 aaKnown RBP4.41□□□□□ -1.7
SF3B1-210ENST00000482158 CRYGNQ8WXF5 182 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 LHX4Q969G2 390 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 C14orf79Q96F83 325 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 NMNAT2Q9BZQ4 307 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 NACA2Q9H009 215 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 ZBP1Q9H171 429 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 TSPY26PQ9H489 355 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 AMBNQ9NP70 447 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 RPS10P5Q9NQ39 176 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 CENPMQ9NSP4 180 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 CLEC5AQ9NY25 188 aa4.41□□□□□ -1.7
SF3B1-210ENST00000482158 IGHV3OR16-12A0A075B7B8 117 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 A0A087WWV3 80 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 ZNF487B1APH4 448 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 IMPA2O14732 288 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 SSX5O60225 188 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 ZNF354AO60765 605 aaPredicted RBP4.4□□□□□ -1.71
SF3B1-210ENST00000482158 STAM2O75886 525 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 PDE5AO76074 875 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 HPP00738 406 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 WNT2P09544 360 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 HOXB7P09629 217 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 PTPN6P29350 595 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 RFC2P35250 354 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 POU3F4P49335 361 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 SLC7A2P52569 658 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 ABRAXAS2Q15018 415 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 RBM43Q6ZSC3 357 aaKnown RBP4.4□□□□□ -1.71
SF3B1-210ENST00000482158 STOX1Q6ZVD7 989 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 PAQR9Q6ZVX9 377 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 ZSCAN30Q86W11 494 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 GPBP1Q86WP2 473 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 FAM71CQ8NEG0 241 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 NCLNQ969V3 563 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 RANBP9Q96S59 729 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 KCNK16Q96T55 309 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 RPP25Q9BUL9 199 aaKnown RBP4.4□□□□□ -1.71
SF3B1-210ENST00000482158 KRT23Q9C075 422 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 ESM1Q9NQ30 184 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 GPR83Q9NYM4 423 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 FZR1Q9UM11 496 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 SLC9A8Q9Y2E8 581 aa4.4□□□□□ -1.71
SF3B1-210ENST00000482158 RNF115Q9Y4L5 304 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms