RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 RYDENQ9NUL5 291 aaKnown RBP16.97■□□□□ 0.31
CLK1-211ENST00000481641 NMRK1Q9NWW6 199 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 UTS2RQ9UKP6 389 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 DLGAP4Q9Y2H0 992 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 TIMM22Q9Y584 194 aa16.97■□□□□ 0.31
CLK1-211ENST00000481641 KRT6AP02538 564 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 KRT6BP04259 564 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 HPNP05981 417 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 IL3P08700 152 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 RHOXF2BP0C7M4 288 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 IMPDH1P20839 514 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 ATP5F1P24539 256 aaPredicted RBP16.96■□□□□ 0.31
CLK1-211ENST00000481641 HMOX2P30519 316 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 PTGDSP41222 190 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 KRT6CP48668 564 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 TRA2BP62995 288 aaKnown RBP16.96■□□□□ 0.31
CLK1-211ENST00000481641 HMGCS1Q01581 520 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 ACSF3Q4G176 576 aaPredicted RBP16.96■□□□□ 0.31
CLK1-211ENST00000481641 WIPI1Q5MNZ9 446 aaPredicted RBP16.96■□□□□ 0.31
CLK1-211ENST00000481641 DCST1Q5T197 706 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 ANGPTL8Q6UXH0 198 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 TRMT10CQ7L0Y3 403 aaKnown RBP16.96■□□□□ 0.31
CLK1-211ENST00000481641 CCDC116Q8IYX3 515 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 NRGNQ92686 78 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 NTNG2Q96CW9 530 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 MTBPQ96DY7 904 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 APIPQ96GX9 242 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 TMEM41AQ96HV5 264 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 LCORQ96JN0 433 aaPredicted RBP16.96■□□□□ 0.31
CLK1-211ENST00000481641 RHOXF2Q9BQY4 288 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 METTL7AQ9H8H3 244 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 GALNT9Q9HCQ5 603 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 TBK1Q9UHD2 729 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 MCM8Q9UJA3 840 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 PSME2Q9UL46 239 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 CAMK2AQ9UQM7 478 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 ZNF780BQ9Y6R6 833 aa16.96■□□□□ 0.31
CLK1-211ENST00000481641 PCDH7O60245 1069 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 UGT2B11O75310 529 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 ULK1O75385 1050 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 PYGBP11216 843 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 HSD3B1P14060 373 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 BMP7P18075 431 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 HSD3B2P26439 372 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 PTPN6P29350 595 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 EMDP50402 254 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 PRKAA2P54646 552 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 RPP38P78345 283 aaKnown RBP16.95■□□□□ 0.3
CLK1-211ENST00000481641 BTKQ06187 659 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 PLCXD2Q0VAA5 305 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 CSTF3Q12996 717 aaKnown RBP16.95■□□□□ 0.3
CLK1-211ENST00000481641 SLC29A2Q14542 456 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 TESK1Q15569 626 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 SLC25A35Q3KQZ1 300 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 TIGD3Q6B0B8 471 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 VASNQ6EMK4 673 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 YRDCQ86U90 279 aaKnown RBP16.95■□□□□ 0.3
CLK1-211ENST00000481641 TMEM200AQ86VY9 491 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 IFT20Q8IY31 132 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 GSPT2Q8IYD1 628 aaKnown RBP16.95■□□□□ 0.3
CLK1-211ENST00000481641 RELL2Q8NC24 303 aaPredicted RBP16.95■□□□□ 0.3
CLK1-211ENST00000481641 KAT2AQ92830 837 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 EXOSC8Q96B26 276 aaKnown RBP16.95■□□□□ 0.3
CLK1-211ENST00000481641 EBPLQ9BY08 206 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 UGT2B28Q9BY64 529 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 EPB41L4BQ9H329 900 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 KCNN3Q9UGI6 736 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 CFL2Q9Y281 166 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 L3MBTL1Q9Y468 752 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 PCDHGB3Q9Y5G1 929 aa16.95■□□□□ 0.3
CLK1-211ENST00000481641 GNG14A0A1W2PPG7 69 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 AHRRA9YTQ3 701 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 ICOSLGO75144 302 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 EPPINO95925 133 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 NAGAP17050 411 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 BMP5P22003 454 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 ZNF628Q5EBL2 1059 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 CES4AQ5XG92 561 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 ARSKQ6UWY0 536 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 NUP54Q7Z3B4 507 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 CEP112Q8N8E3 955 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 OR1J4Q8NGS1 313 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 OR9A2Q8NGT5 310 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 C16orf78Q8WTQ4 265 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 MZB1Q8WU39 189 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 HSPBAP1Q96EW2 488 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 TXLNGYQ9BZA5 131 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 EMCNQ9ULC0 261 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 MAPRE3Q9UPY8 281 aa16.94■□□□□ 0.3
CLK1-211ENST00000481641 A0A1W2PPM1 405 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 HSPB2A8KAH6 182 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 FAM47E-STBD1D6RA91 191 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 CEACAM8P31997 349 aaPredicted RBP16.93■□□□□ 0.3
CLK1-211ENST00000481641 PPICP45877 212 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 NAGLUP54802 743 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 FOXA1P55317 472 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 LCP2Q13094 533 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 HSPB2Q16082 182 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 PRSS53Q2L4Q9 553 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 SLC22A9Q8IVM8 553 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms