RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 IL12BP29460 328 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 FEN1P39748 380 aaKnown RBP10.5□□□□□ -0.73
CCM2-213ENST00000480658 CASP3P42574 277 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 CDK9P50750 372 aaKnown RBP10.5□□□□□ -0.73
CCM2-213ENST00000480658 NUP107P57740 925 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 FBXW4P57775 412 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 RCAN2Q14206 197 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 ZNHIT3Q15649 155 aaPredicted RBP10.5□□□□□ -0.73
CCM2-213ENST00000480658 SPDYAQ5MJ70 313 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 LIPMQ5VYY2 423 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 CES4AQ5XG92 561 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 MEX3BQ6ZN04 569 aaKnown RBP10.5□□□□□ -0.73
CCM2-213ENST00000480658 TRIM46Q7Z4K8 759 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 CCNYL1Q8N7R7 359 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 OR52R1Q8NGF1 315 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 MZB1Q8WU39 189 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 ZNF764Q96H86 408 aaPredicted RBP10.5□□□□□ -0.73
CCM2-213ENST00000480658 ZFP3Q96NJ6 502 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 BBS4Q96RK4 519 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 OSBPL11Q9BXB4 747 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 PRDM14Q9GZV8 571 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 UBQLN3Q9H347 655 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 ACBD3Q9H3P7 528 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 L2HGDHQ9H9P8 463 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 C3orf14Q9HBI5 128 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 EML4Q9HC35 981 aaKnown RBP10.5□□□□□ -0.73
CCM2-213ENST00000480658 MCCC2Q9HCC0 563 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 SLC35C2Q9NQQ7 365 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 SDHAF3Q9NRP4 125 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 ZNF225Q9UK10 706 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 PLLPQ9Y342 182 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 TMED5Q9Y3A6 229 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 CENPEQ02224 2701 aa10.5□□□□□ -0.73
CCM2-213ENST00000480658 DIDO1Q9BTC0 2240 aaKnown RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 A0A087WV62 115 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 NPIPB8E9PQR5 432 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 GOLGA8RI6L899 631 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 SLC28A1O00337 649 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 CBR3O75828 277 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 TRAPPC6AO75865 159 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 WISP2O76076 250 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 GOSR1O95249 250 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 IL2RAP01589 272 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 ABCB1P08183 1280 aaPredicted RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 IL3P08700 152 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 CT62P0C5K7 136 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 IGFBP2P18065 325 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 KRT4P19013 534 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 TSPAN8P19075 237 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 S1PR1P21453 382 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 PRPH2P23942 346 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 TIMP3P35625 211 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 SERPINB5P36952 375 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 CLK3P49761 638 aaKnown RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 DUSP8Q13202 625 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 TOMM20Q15388 145 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 VPS26BQ4G0F5 336 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 ZNF628Q5EBL2 1059 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 EMC4Q5J8M3 183 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 TIGD3Q6B0B8 471 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 AAGABQ6PD74 315 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 ENPP6Q6UWR7 440 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 LURAP1LQ8IV03 231 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 SRRM1Q8IYB3 904 aaKnown RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 MARVELD2Q8N4S9 558 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 OR5M9Q8NGP3 310 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 OMA1Q96E52 524 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 C11orf24Q96F05 449 aaPredicted RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 CNRIP1Q96F85 164 aaPredicted RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 SLC35A4Q96G79 324 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 LURAP1Q96LR2 239 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 ZNF681Q96N22 645 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 COL21A1Q96P44 957 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 CCT7Q99832 543 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 ITPAQ9BY32 194 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 NXF5Q9H1B4 397 aaKnown RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 GSTO2Q9H4Y5 243 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 MYNNQ9NPC7 610 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 OXSMQ9NWU1 459 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 MKS1Q9NXB0 559 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 TAS2R7Q9NYW3 318 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 ZNF629Q9UEG4 869 aaPredicted RBP10.49□□□□□ -0.73
CCM2-213ENST00000480658 ABCG2Q9UNQ0 655 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 LIPGQ9Y5X9 500 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 MYO9AB2RTY4 2548 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 CELSR2Q9HCU4 2923 aa10.49□□□□□ -0.73
CCM2-213ENST00000480658 NOTCH2Q04721 2471 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 A0A1B0GTL3 188 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 PRAMEF25A6NGN4 478 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 WASHC1A8K0Z3 465 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 G3V2L1 256 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 LINC01387J3KSC0 135 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 PPP6CO00743 305 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 SNPHO15079 494 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 PLIN3O60664 434 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 ERN1O75460 977 aaKnown RBP10.48□□□□□ -0.73
CCM2-213ENST00000480658 EPPINO95925 133 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 CBX7O95931 251 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 PROCP04070 461 aa10.48□□□□□ -0.73
CCM2-213ENST00000480658 FAM153BP0C7A2 387 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms