RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 EXOSC1Q9Y3B2 195 aaKnown RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 PDCD5O14737 125 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 CXCL10P02778 98 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 ERP29P30040 261 aaKnown RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 LCN1P31025 176 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 CAMK1Q14012 370 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 SLC5A12Q1EHB4 618 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 GARNL3Q5VVW2 1013 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 FIGLAQ6QHK4 219 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 GKN2Q86XP6 184 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 EPYCQ99645 322 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 APOOQ9BUR5 198 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 TAPBPLQ9BX59 468 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 FBRSQ9HAH7 460 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 BRD7Q9NPI1 651 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 HPF1Q9NWY4 346 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 ANKMY1Q9P2S6 941 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF69Q9UC07 566 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 KANTRA0A1W2PQU2 76 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 HTR2BP41595 481 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 MLIPQ5VWP3 458 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 LIPKQ5VXJ0 399 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 HMBOX1Q6NT76 420 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 SLCO4C1Q6ZQN7 724 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 LILRA3Q8N6C8 439 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-206ENST00000479501 CSNK1A1LQ8N752 337 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 OR51G2Q8NGK0 314 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 C1QTNF3Q9BXJ4 246 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 NKX2-4Q9H2Z4 354 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 ASB1Q9Y576 335 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 TRIP11Q15643 1979 aa13.6□□□□□ -0.23
COL20A1-206ENST00000479501 J3QLW9 94 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 SCDO00767 359 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 PCDHGA12O60330 932 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 SLCO2B1O94956 709 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 NUDT7P0C024 238 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF19P17023 458 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 PAMR1Q6UXH9 720 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 DEFB119Q8N690 84 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 OR2T33Q8NG76 320 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 PHOSPHO1Q8TCT1 267 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 ARRDC3Q96B67 414 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 NMNAT1Q9HAN9 279 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 SARDHQ9UL12 918 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 AP1M2Q9Y6Q5 423 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CLEC3AO75596 197 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 LCKP06239 509 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CD2P06729 351 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 IL1RNP18510 177 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CXCR1P25024 350 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 GJA4P35212 333 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 PIN1Q13526 163 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 NHSL2Q5HYW2 709 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 Q8N402 240 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CHDHQ8NE62 594 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 LYSMD1Q96S90 227 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 GPR174Q9BXC1 333 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 SMURF1Q9HCE7 757 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 OLAHQ9NV23 265 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 PLCL2Q9UPR0 1127 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CDC123O75794 336 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 ARL6IP5O75915 188 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 RENP00797 406 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 OSMP13725 252 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CD40LGP29965 261 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CDKN2CP42773 168 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CEBPGP53567 150 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 SLC3A1Q07837 685 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 GALNTL5Q7Z4T8 443 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 INO80EQ8NBZ0 244 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 DNAJA4Q8WW22 397 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 SLC25A36Q96CQ1 311 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 MMABQ96EY8 250 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-206ENST00000479501 GPER1Q99527 375 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 CD93Q9NPY3 652 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 C14orf105Q9NVL8 296 aa13.59□□□□□ -0.23
COL20A1-206ENST00000479501 C2orf92A0A1B0GVN3 265 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 SH3D21A4FU49 640 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 GPR89AB7ZAQ6 455 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 FOXE1O00358 373 aaPredicted RBP13.58□□□□□ -0.23
COL20A1-206ENST00000479501 GPR89BP0CG08 455 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 HK1P19367 917 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 CRHBPP24387 322 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 SLC6A6P31641 620 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 NR4A2P43354 598 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 GCGRP47871 477 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 PAPD5Q8NDF8 572 aaKnown RBP13.58□□□□□ -0.23
COL20A1-206ENST00000479501 OR51A7Q8NH64 312 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 CREB3L1Q96BA8 519 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.23
COL20A1-206ENST00000479501 COMMD4Q9H0A8 199 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 PRTFDC1Q9NRG1 225 aa13.58□□□□□ -0.23
COL20A1-206ENST00000479501 GIMD1P0DJR0 217 aa13.58□□□□□ -0.24
COL20A1-206ENST00000479501 POLR2IP36954 125 aaKnown RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 MAD2L1BPQ15013 274 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-206ENST00000479501 OR8D2Q9GZM6 311 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms