RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 NQO1P15559 274 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 CSNK2A2P19784 350 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 FBLP22087 321 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 TLX1P31314 330 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 RORAP35398 523 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 PGM1P36871 562 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ETV5P41161 510 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 OR1D4P47884 311 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CDK9P50750 372 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 HBA1P69905 142 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 IGLV3-21P80748 117 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 ID2Q02363 134 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 FOLH1Q04609 750 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CEACAM7Q14002 265 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 SELPLGQ14242 412 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 IL11RAQ14626 422 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 MLC1Q15049 377 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ZNF750Q32MQ0 723 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 PIGGQ5H8A4 983 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 RABL3Q5HYI8 236 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ARHGAP40Q5TG30 622 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 HES3Q5TGS1 186 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 C1orf189Q5VU69 101 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CPZQ66K79 652 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 NANOGP8Q6NSW7 305 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 FAM180BQ6P0A1 224 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 PGM2L1Q6PCE3 622 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 DHRS13Q6UX07 377 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 MED25Q71SY5 747 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ZNF551Q7Z340 670 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 SLCO6A1Q86UG4 719 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ZC3H7AQ8IWR0 971 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 SCUBE1Q8IWY4 988 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 SLC15A3Q8IY34 581 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ZNF595Q8IYB9 648 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 SAMD14Q8IZD0 417 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 ARHGAP24Q8N264 748 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 VPS37AQ8NEZ2 397 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 OR51Q1Q8NH59 317 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ZFP28Q8NHY6 868 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 PSMA8Q8TAA3 256 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 SUN3Q8TAQ9 357 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 OR5P2Q8WZ92 322 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 TANKQ92844 425 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ANKRD9Q96BM1 317 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 RNF31Q96EP0 1072 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ZBED6CLQ96FA7 236 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 AURKBQ96GD4 344 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 PEX11GQ96HA9 241 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CLPTM1LQ96KA5 538 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 AMDHD1Q96NU7 426 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ANKRD27Q96NW4 1050 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 DEPDC7Q96QD5 511 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 OR1F2PQ96R84 312 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 PANX1Q96RD7 426 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 BBS4Q96RK4 519 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CTRCQ99895 268 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 HOPXQ9BPY8 73 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 THTPAQ9BU02 230 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 TRIM8Q9BZR9 551 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 MMADHCQ9H3L0 296 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 GLIPR2Q9H4G4 154 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 IKZF5Q9H5V7 419 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 RPF2Q9H7B2 306 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 CXorf36Q9H7Y0 433 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 NANOGQ9H9S0 305 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 FBXO8Q9NRD0 319 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 LANCL2Q9NS86 450 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 SLC22A11Q9NSA0 550 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 SIRT3Q9NTG7 399 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 GIMAP4Q9NUV9 329 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CMTM6Q9NX76 183 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 TAS2R9Q9NYW1 312 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 AKAP7Q9P0M2 348 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 TMEM181Q9P2C4 612 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 CGGBP1Q9UFW8 167 aaPredicted RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 VPS4AQ9UN37 437 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CDC14AQ9UNH5 594 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CLCA2Q9UQC9 943 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 MRPS33Q9Y291 106 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 CLDN16Q9Y5I7 305 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 GMEB1Q9Y692 573 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 MAU2Q9Y6X3 613 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 SDK2Q58EX2 2172 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CFAP54Q96N23 3096 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 IGLV3-12A0A075B6K2 115 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 CCDC187A0A096LP49 1063 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 A0A1W2PNU3 283 aaPredicted RBP6.22□□□□□ -1.41
USP48-208ENST00000479177 PRORSD1PA6NEY8 169 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 SLC30A4O14863 429 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 POLR1CO15160 346 aaPredicted RBP6.22□□□□□ -1.41
USP48-208ENST00000479177 NVLO15381 856 aaKnown RBP6.22□□□□□ -1.41
USP48-208ENST00000479177 B4GALT2O60909 372 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 LDB3O75112 727 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 JRKO75564 520 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 ANP32DO95626 131 aa6.22□□□□□ -1.41
USP48-208ENST00000479177 CPSF4O95639 269 aaKnown RBP6.22□□□□□ -1.41
USP48-208ENST00000479177 GPR75O95800 540 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms