RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 DDX47Q9H0S4 455 aaKnown RBP3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 MAGEF1Q9HAY2 307 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 DEPPQ9NTK1 212 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.16□□□□□ -1.93e-7■■□□□ 13.4
SMARCA1-204ENST00000478420 PLEK2Q9NYT0 353 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 THYN1Q9P016 225 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 ZMAT5Q9UDW3 170 aaKnown RBP3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 CHTOPQ9Y3Y2 248 aaKnown RBP3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 MFHAS1Q9Y4C4 1052 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 MAB21L2Q9Y586 359 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 SMAD5-AS1Q9Y6J3 95 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 UMODL1Q5DID0 1318 aa3.16□□□□□ -1.9
SMARCA1-204ENST00000478420 GOLGA6L7A0A1B0GV03 622 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 MACROD2A1Z1Q3 448 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 MFSD2BA6NFX1 497 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 TMCO5BA8MYB1 307 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 SHISA9B4DS77 424 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 H0YIV9 168 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CCSO14618 274 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CHUKO15111 745 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CHADO15335 359 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CACNG3O60359 315 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 IDH1O75874 414 aaKnown RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 GAS8O95995 478 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 HOXD4P09016 255 aaPredicted RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CLUP10909 449 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 EPB41P11171 864 aaKnown RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 ANPEPP15144 967 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 DRD5P21918 477 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 GALP22466 123 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 LMO2P25791 158 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 OR1G1P47890 313 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 PLD1Q13393 1074 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 SIX1Q15475 284 aaPredicted RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CCDC57Q2TAC2 916 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 USH1GQ495M9 461 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 FILIP1LQ4L180 1135 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 MUC21Q5SSG8 566 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 C1orf185Q5T7R7 199 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 DLEU7Q6UYE1 221 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CACUL1Q86Y37 369 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 TMEM126BQ8IUX1 230 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 GRAMD2AQ8IUY3 354 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 SLC22A9Q8IVM8 553 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 LAX1Q8IWV1 398 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 OR56B1Q8NGI3 324 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 OR52B4Q8NGK2 314 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 OR52K1Q8NGK4 314 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 PCNPQ8WW12 178 aaKnown RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 SLCO4A1Q96BD0 722 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 ZBTB18Q99592 522 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 BCL7BQ9BQE9 202 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 RPP25Q9BUL9 199 aaKnown RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 ZNF416Q9BWM5 594 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 RBM24Q9BX46 236 aaKnown RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 GPR61Q9BZJ8 451 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 LRRCC1Q9C099 1032 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 TMEM245Q9H330 911 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CLSTN2Q9H4D0 955 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 YY1AP1Q9H869 796 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 RPS10P5Q9NQ39 176 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 CNOT2Q9NZN8 540 aaKnown RBP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 ATP6V1HQ9UI12 483 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 PSME2Q9UL46 239 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 ERVK-19Q9WJR5 959 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 NIP7Q9Y221 180 aaKnown RBP eCLIP3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 ENTPD4Q9Y227 616 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 SPACA6W5XKT8 324 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 MROH5Q6ZUA9 1318 aa3.15□□□□□ -1.91
SMARCA1-204ENST00000478420 ATP6AP2A0A1C7CYW4 349 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 IGLON5A6NGN9 336 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 FAM47DPA6NHR8 397 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 NCF1BA6NI72 391 aaPredicted RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 SRRM4A7MD48 611 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 NCF1CA8MVU1 366 aaPredicted RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 K7EQG2 157 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 KIF2AO00139 706 aaPredicted RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 FBP2O00757 339 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 XPO1O14980 1071 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 CTAGE5O15320 804 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 GALR3O60755 368 aaPredicted RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 FGF4P08620 206 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 IQCF3P0C7M6 154 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 EZRP15311 586 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 OTX2P32243 289 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 SSR1P43307 286 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 ZFP36L2P47974 494 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 FHITP49789 147 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 ETV1P50549 477 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 CCR4P51679 360 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 PRRX1P54821 245 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 VCPP55072 806 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 ACY1Q03154 408 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 PPP1R8Q12972 351 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 LCP2Q13094 533 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 FASTKQ14296 549 aaKnown RBP3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 SPHARQ15513 63 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 HIGD2BQ4VC39 106 aa3.14□□□□□ -1.91
SMARCA1-204ENST00000478420 PRAMEF7Q5VXH5 474 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms