RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CREB1P16220 341 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 NAGAP17050 411 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ATP5A1P25705 553 aaKnown RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ABCD3P28288 659 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 HPDP32754 393 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 CETN2P41208 172 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 RGS4P49798 205 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 TPD52P55327 224 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 NRG3P56975 720 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 RPS13P62277 151 aaKnown RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ACTG1P63261 375 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 PLIN5Q00G26 463 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 PON3Q15166 354 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 RAB35Q15286 201 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 CTU2Q2VPK5 515 aaKnown RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 AGAP6Q5VW22 663 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 C11orf71Q6IPW1 123 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ADNP2Q6IQ32 1131 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 PAQR3Q6TCH7 311 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 TREML4Q6UXN2 200 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 NUP54Q7Z3B4 507 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 PLCZ1Q86YW0 608 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 MYO1HQ8N1T3 1032 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 PLD6Q8N2A8 252 aaKnown RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ACOT4Q8N9L9 421 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 BANPQ8N9N5 519 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 C17orf47Q8NEP4 570 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 OR6K3Q8NGY3 331 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 FAM216AQ8WUB2 273 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ANKRD7Q92527 254 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 RIT1Q92963 219 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 S100PBPQ96BU1 408 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 F2RL3Q96RI0 385 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 TACO1Q9BSH4 297 aaKnown RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 PINK1Q9BXM7 581 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 CACNG6Q9BXT2 260 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 BHLHE41Q9C0J9 482 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 NT5DC2Q9H857 520 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 METTL7AQ9H8H3 244 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 COPS7BQ9H9Q2 264 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 FAIMQ9NVQ4 179 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 FBXL2Q9UKC9 423 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF490Q9ULM2 529 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 TFR2Q9UP52 801 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 MALRD1Q5VYJ5 2156 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 PRR14LQ5THK1 2151 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 WASHC1A8K0Z3 465 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 SHISA9B4DS77 424 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 B4DXG7 233 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 AP3B1O00203 1094 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 H2AFYO75367 372 aaKnown RBP6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 PPM1BO75688 479 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 AQP8O94778 261 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 SCELO95171 688 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 GUCA1CO95843 209 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 ZSCAN5DPP0CG00 497 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 PEPDP12955 493 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 CPN2P22792 545 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 ADH6P28332 368 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 SSTR4P31391 388 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 TTKP33981 857 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 GALNSP34059 522 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 MAGEA1P43355 309 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 KCNC1P48547 511 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 EEFSECP57772 596 aaKnown RBP6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 C21orf58P58505 322 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 BSPH1Q075Z2 132 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 SLBPQ14493 270 aaKnown RBP eCLIP6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 TAB1Q15750 504 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 BEND4Q6ZU67 534 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 UBQLNLQ8IYU4 475 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 PRR22Q8IZ63 422 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF615Q8N8J6 731 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 STEAP2Q8NFT2 490 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 ATG4AQ8WYN0 398 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 HSD17B8Q92506 261 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 TANKQ92844 425 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 LINGO1Q96FE5 620 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 KCNC2Q96PR1 638 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 NDNQ99608 321 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 SOX7Q9BT81 388 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 TBCDQ9BTW9 1192 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 OSBPL11Q9BXB4 747 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 HDHD5Q9BXW7 423 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 ROGDIQ9GZN7 287 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 PITHD1Q9GZP4 211 aaPredicted RBP6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 RPF2Q9H7B2 306 aaKnown RBP6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 NGBQ9NPG2 151 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 FANCFQ9NPI8 374 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 DNAJC11Q9NVH1 559 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 TRMT6Q9UJA5 497 aaKnown RBP6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 SNX8Q9Y5X2 465 aa6.53□□□□□ -1.36
SPTLC1-205ENST00000477888 YLPM1P49750 1951 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 IGHV4-61A0A0C4DH41 118 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ZCWPW2A0A1B0GU75 182 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 ANKDD1BA6NHY2 528 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 H7C417 338 aa6.52□□□□□ -1.37
SPTLC1-205ENST00000477888 RTCAO00442 366 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms