RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 KLHL35Q6PF15 583 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 RBM45Q8IUH3 476 aaKnown RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF441Q8N8Z8 693 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 OR4D9Q8NGE8 314 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 BBS10Q8TAM1 723 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 GEMIN6Q8WXD5 167 aaKnown RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 DUSP22Q9NRW4 184 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 SEMA3GQ9NS98 782 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 PPIEQ9UNP9 301 aaKnown RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 A0A0G2JPF8 293 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF860A6NHJ4 632 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 HNRNPCL2B2RXH8 293 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 HNRNPCL3B7ZW38 293 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 hCG_2039718K7EN88 272 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 SUV39H1O43463 412 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 CTNSO60931 367 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 BCAS1O75363 584 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 SERPIND1P05546 499 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF883P0CG24 379 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 HNRNPCL4P0DMR1 293 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 NTSP30990 170 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 CHI3L1P36222 383 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 BUD31P41223 144 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 STT3AP46977 705 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 C21orf59P57076 290 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 MRPS35P82673 323 aaKnown RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 CLPPQ16740 277 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 SYT16Q17RD7 645 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 NIPAL1Q6NVV3 410 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 CD300LDQ6UXZ3 194 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF517Q6ZMY9 492 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 ZNF595Q8IYB9 648 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 PTPMT1Q8WUK0 201 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 ZDHHC12Q96GR4 267 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 TGM7Q96PF1 710 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 SLC38A3Q99624 504 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 RBM4BQ9BQ04 359 aaKnown RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 RBM4Q9BWF3 364 aaKnown RBP11.31□□□□□ -0.6
PRPF39-203ENST00000477626 YY1AP1Q9H869 796 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 P2RX2Q9UBL9 471 aa11.31□□□□□ -0.6
PRPF39-203ENST00000477626 SPTBP11277 2137 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 DPPA5A6NC42 116 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 YKT6O15498 198 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 DIRAS1O95057 198 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 RYKP34925 604 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 CSTF1Q05048 431 aaKnown RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 KCTD21Q4G0X4 260 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 LRRC23Q53EV4 343 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 TMEM71Q6P5X7 295 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 SAMD14Q8IZD0 417 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 SLC38A9Q8NBW4 561 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PIK3C3Q8NEB9 887 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 KAT2AQ92830 837 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 NECTIN3Q9NQS3 549 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PAK1IP1Q9NWT1 392 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 IFT80Q9P2H3 777 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 FTSJ1Q9UET6 329 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 FCMRO60667 390 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 H6PDO95479 791 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 AQP1P29972 269 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PRKAR1BP31321 381 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 KEAP1Q14145 624 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 IFI44LQ53G44 452 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 HIPK1Q86Z02 1210 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 POGLUT1Q8NBL1 392 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 ADAMTS18Q8TE60 1221 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PIP5K1AQ99755 562 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PIGUQ9H490 435 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 FBXO34Q9NWN3 711 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 ANGPT4Q9Y264 503 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 A0A0A6YYC8 382 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 I3L1I5 382 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 ADAM11O75078 769 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 TIAF1O95411 115 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 RHCEP18577 417 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PRKACGP22612 351 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 MED21Q13503 144 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 MICAQ29983 383 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 QSOX2Q6ZRP7 698 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 MRGPREQ86SM8 312 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 SLCO6A1Q86UG4 719 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PARP8Q8N3A8 854 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 FAM71CQ8NEG0 241 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 OR6C4Q8NGE1 309 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 DIO2Q92813 273 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 SDF2Q99470 211 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 DUSP23Q9BVJ7 150 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 BATF3Q9NR55 127 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 ZCCHC3Q9NUD5 404 aaKnown RBP11.3□□□□□ -0.6
PRPF39-203ENST00000477626 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
PRPF39-203ENST00000477626 CT45A8P0DMV1 189 aa11.29□□□□□ -0.6
PRPF39-203ENST00000477626 CT45A9P0DMV2 189 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms