RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 A6NL46 340 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 OR6C76A6NM76 312 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 UPK1AO00322 258 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 EMC8O43402 210 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 BCAS2O75934 225 aaPredicted RBP14.22□□□□□ -0.13
SEC13-215ENST00000477547 S1PR1P21453 382 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 CDKN2CP42773 168 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 TP53BP2Q13625 1128 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 RAPSNQ13702 412 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 EBPQ15125 230 aaKnown RBP14.22□□□□□ -0.13
SEC13-215ENST00000477547 JMJD6Q6NYC1 403 aaPredicted RBP14.22□□□□□ -0.13
SEC13-215ENST00000477547 SLC5A8Q8N695 610 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 SIRT6Q8N6T7 355 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 ZNF615Q8N8J6 731 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 OR56A1Q8NGH5 318 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 C16orf52Q8NHV5 167 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 TSPEARQ8WU66 669 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 LRRC37BQ96QE4 947 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 CCDC106Q9BWC9 280 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 ITPAQ9BY32 194 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 SLC52A3Q9NQ40 469 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 EQTNQ9NQ60 294 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 SERHLQ9NQF3 203 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 GPR83Q9NYM4 423 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 VPS4AQ9UN37 437 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 C19orf53Q9UNZ5 99 aaPredicted RBP14.22□□□□□ -0.13
SEC13-215ENST00000477547 DTX4Q9Y2E6 619 aa14.22□□□□□ -0.13
SEC13-215ENST00000477547 HEMK1Q9Y5R4 338 aaPredicted RBP14.22□□□□□ -0.13
SEC13-215ENST00000477547 BBIP1A8MTZ0 92 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 PRKNO60260 465 aaPredicted RBP14.21□□□□□ -0.13
SEC13-215ENST00000477547 ZFAND5O76080 213 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 PSMG1O95456 288 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 ANP32DO95626 131 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 GSNP06396 782 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 CCL11P51671 97 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 PRKAG1P54619 331 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 RNF4P78317 190 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 TREML1Q86YW5 311 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 TRIML2Q8N7C3 387 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 POU5F2Q8N7G0 328 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 NUP43Q8NFH3 380 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 OR8K3Q8NH51 312 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 THAP3Q8WTV1 239 aaPredicted RBP14.21□□□□□ -0.13
SEC13-215ENST00000477547 GTF2H4Q92759 462 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 MOAP1Q96BY2 351 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 SLC35A5Q9BS91 424 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 WWTR1Q9GZV5 400 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 PRODH2Q9UF12 536 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 CFL2Q9Y281 166 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 NDUFAF1Q9Y375 327 aa14.21□□□□□ -0.13
SEC13-215ENST00000477547 A8MUI8 341 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 NME6O75414 186 aaPredicted RBP14.2□□□□□ -0.14
SEC13-215ENST00000477547 ITGB2P05107 769 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 UQCRC2P22695 453 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 CHI3L1P36222 383 aaPredicted RBP14.2□□□□□ -0.14
SEC13-215ENST00000477547 CCT3P49368 545 aaKnown RBP14.2□□□□□ -0.14
SEC13-215ENST00000477547 EMDP50402 254 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 CBX1P83916 185 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 CYLC2Q14093 348 aaPredicted RBP14.2□□□□□ -0.14
SEC13-215ENST00000477547 MYBPC3Q14896 1274 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 TLR1Q15399 786 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 NNATQ16517 81 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 TBR1Q16650 682 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 MMEL1Q495T6 779 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 GTDC1Q4AE62 458 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 PAGE3Q5JUK9 113 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 COLEC12Q5KU26 742 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 HLA-DQA1Q5Y7H0 255 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 FCRLBQ6BAA4 426 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 REP15Q6BDI9 236 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 ANGPTL8Q6UXH0 198 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 DHDDSQ86SQ9 333 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 RETREG3Q86VR2 466 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 CLEC4FQ8N1N0 589 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 GOT1L1Q8NHS2 421 aaPredicted RBP14.2□□□□□ -0.14
SEC13-215ENST00000477547 NUBPLQ8TB37 319 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 FBXO30Q8TB52 745 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 JADE3Q92613 823 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 EXTL1Q92935 676 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 SLC35G5Q96KT7 338 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 FOLH1BQ9HBA9 442 aa14.2□□□□□ -0.14
SEC13-215ENST00000477547 A0A096LPI6 279 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 C2orf92A0A1B0GVN3 265 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 MRASO14807 208 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 ERN1O75460 977 aaKnown RBP14.19□□□□□ -0.14
SEC13-215ENST00000477547 KCNH1O95259 989 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 COX4I1P13073 169 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 TRPC1P48995 793 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 POLE2P56282 527 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 SOX8P57073 446 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 NFATC3Q12968 1075 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 NFYCQ13952 458 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 LASP1Q14847 261 aaKnown RBP14.19□□□□□ -0.14
SEC13-215ENST00000477547 CRB2Q5IJ48 1285 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 FAM91A1Q658Y4 838 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 B3GNTL1Q67FW5 361 aaPredicted RBP14.19□□□□□ -0.14
SEC13-215ENST00000477547 TCTN3Q6NUS6 607 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 MFSD12Q6NUT3 480 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 BHLHB9Q6PI77 547 aa14.19□□□□□ -0.14
SEC13-215ENST00000477547 ZNF621Q6ZSS3 439 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms