RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 PIAS3Q9Y6X2 628 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 PROM1O43490 865 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 CXCR1P25024 350 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 NUP62P37198 522 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-220ENST00000477528 MNDAP41218 407 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 AMZ1Q400G9 498 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 NRMQ8IXM6 262 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 TMEM138Q9NPI0 162 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 CYP8B1Q9UNU6 501 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 RNH1P13489 461 aaKnown RBP13.84□□□□□ -0.19
HDAC6-220ENST00000477528 PRPH2P23942 346 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 EDNRAP25101 427 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 PPP3R1P63098 170 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 REEP5Q00765 189 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 WSCD2Q2TBF2 565 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 ANKDD1AQ495B1 522 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 COX20Q5RI15 118 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 SLC38A5Q8WUX1 472 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 DMRTB1Q96MA1 342 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 S100A13Q99584 98 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 MACROD1Q9BQ69 325 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 RBCK1Q9BYM8 510 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 C8orf33Q9H7E9 229 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-220ENST00000477528 ZBTB20Q9HC78 741 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-220ENST00000477528 PRODH2Q9UF12 536 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 B3GNT3Q9Y2A9 372 aa13.84□□□□□ -0.19
HDAC6-220ENST00000477528 HEMK1Q9Y5R4 338 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-220ENST00000477528 HYKKA2RU49 373 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 LINC01553A4QN01 128 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 ASPDHA6ND91 283 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 ZNF879B4DU55 563 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 ITGA10O75578 1167 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 AHCYP23526 432 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 SYPL1Q16563 259 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 Q6ZPB1 254 aaPredicted RBP13.83□□□□□ -0.19
HDAC6-220ENST00000477528 ALG14Q96F25 216 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 MED16Q9Y2X0 877 aa13.83□□□□□ -0.19
HDAC6-220ENST00000477528 TRAPPC13A5PLN9 417 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 VNN2O95498 520 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ZNF888P0CJ79 500 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-220ENST00000477528 MAGEA8P43361 318 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 B4GALNT1Q00973 533 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ELOCQ15369 112 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 TRIM73Q86UV7 250 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 DNAJC22Q8N4W6 341 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 MEIOBQ8N635 442 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 PROKR2Q8NFJ6 384 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 OR51A7Q8NH64 312 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 WDR20Q8TBZ3 569 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 PHOSPHO1Q8TCT1 267 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 NXPE3Q969Y0 559 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 TREX2Q9BQ50 279 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-220ENST00000477528 CCDC32Q9BV29 185 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 AMBRA1Q9C0C7 1298 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 CXorf36Q9H7Y0 433 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 THAP10Q9P2Z0 257 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ENTPD2Q9Y5L3 495 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 A0A1B0GTW7 788 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ANXA2P2A6NMY6 339 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 PCDHGA12O60330 932 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ANXA2P07355 339 aaKnown RBP13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ISL1P61371 349 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ACBD7Q8N6N7 88 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 TBC1D15Q8TC07 691 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 TAPBPLQ9BX59 468 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 RGPD3A6NKT7 1758 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-220ENST00000477528 RGPD4Q7Z3J3 1758 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 FUOMA2VDF0 154 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 IRS1P35568 1242 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 RGS6P49758 472 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 SHC2P98077 582 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 FIGNL1Q6PIW4 674 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 TECPR1Q7Z6L1 1165 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ANKK1Q8NFD2 765 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 NEURL3Q96EH8 262 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 ZSWIM3Q96MP5 696 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 NECTIN4Q96NY8 510 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 OR51E2Q9H255 320 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 IL21RQ9HBE5 538 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 GPN1Q9HCN4 374 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-220ENST00000477528 THSD1Q9NS62 852 aa13.83□□□□□ -0.2
HDAC6-220ENST00000477528 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-220ENST00000477528 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-220ENST00000477528 SLC22A31A6NKX4 558 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 CCR2P41597 374 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 GAB1Q13480 694 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 TANGO2Q6ICL3 276 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 ARMCX6Q7L4S7 300 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 COQ8BQ96D53 544 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 MMABQ96EY8 250 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-220ENST00000477528 C14orf119Q9NWQ9 140 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 NDUFAF4Q9P032 175 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 GPR52Q9Y2T5 361 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 GRXCR1A8MXD5 290 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 BOLA2-SMG1P6H3BVE0 249 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 CHMP24386 653 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 ACTC1P68032 377 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 ACTA1P68133 377 aa13.82□□□□□ -0.2
HDAC6-220ENST00000477528 DPTQ07507 201 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms