RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 PRODH2Q9UF12 536 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 MIOXQ9UGB7 285 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 VSIG4Q9Y279 399 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 KLHDC2Q9Y2U9 406 aa2.52□□□□□ -2.01
TARDBP-208ENST00000477447 DHX29Q7Z478 1369 aaKnown RBP2.51□□□□□ -2.01
TARDBP-208ENST00000477447 RPGRIP1LQ68CZ1 1315 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 A0A0J9YVX5 310 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 ZBTB14O43829 449 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 IGHV3-9P01782 118 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 SLC4A1P02730 911 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 SNRPCP09234 159 aaKnown RBP2.51□□□□□ -2.01
TARDBP-208ENST00000477447 WNT2P09544 360 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 AHCYP23526 432 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 MAGEA9P43362 315 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 YBEYP58557 167 aaPredicted RBP2.51□□□□□ -2.01
TARDBP-208ENST00000477447 HAND2P61296 217 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF85Q03923 595 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF33BQ06732 778 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 CD226Q15762 336 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 MICAQ29983 383 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 ZNF528Q3MIS6 628 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 MS4A13Q5J8X5 152 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 ATRAIDQ6UW56 229 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 CCBE1Q6UXH8 406 aaPredicted RBP2.51□□□□□ -2.01
TARDBP-208ENST00000477447 TSEN54Q7Z6J9 526 aaKnown RBP2.51□□□□□ -2.01
TARDBP-208ENST00000477447 RABEPKQ7Z6M1 372 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 ZBED8Q8IZ13 594 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 CHCHD4Q8N4Q1 142 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 OR52J3Q8NH60 311 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 MRAPQ8TCY5 172 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 GTSF1Q8WW33 167 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 PHYHIPQ92561 330 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 PPP1R16AQ96I34 528 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 PIWIL1Q96J94 861 aaKnown RBP2.51□□□□□ -2.01
TARDBP-208ENST00000477447 SERAC1Q96JX3 654 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 COQ7Q99807 217 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 CBWD1Q9BRT8 395 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 TRIM9Q9C026 710 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 NACA2Q9H009 215 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 TNFRSF19Q9NS68 423 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 HOMER3Q9NSC5 361 aa2.51□□□□□ -2.01
TARDBP-208ENST00000477447 AGRNO00468 2067 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 NPIPA5A0A0B4J1W7 369 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 MFSD2BA6NFX1 497 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 ARHGAP42A6NI28 874 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 SLC9B1P1A6NJY1 282 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 EFCAB7A8K855 629 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 NPIPA5E9PKD4 350 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 BUB1O43683 1085 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 HTATSF1O43719 755 aaKnown RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 PRAMEF12O95522 483 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 VDRP11473 427 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 PVRP15151 417 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 CYP11B1P15538 503 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 KLK2P20151 261 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 ACP1P24666 158 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 SFNP31947 248 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 MAGEA4P43358 317 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 NOVP48745 357 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 FNTAP49354 379 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 SGSHP51688 502 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 KRTAP10-3P60369 221 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 PPIAP62937 165 aaKnown RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 NOP14P78316 857 aaKnown RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 BNIP1Q12981 228 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 AGKQ53H12 422 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 HERC4Q5GLZ8 1057 aaPredicted RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 C1orf186Q6ZWK4 172 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 TAF8Q7Z7C8 310 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 RANBP3LQ86VV4 465 aaPredicted RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 AMZ2Q86W34 360 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 GPBP1Q86WP2 473 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 RFESDQ8TAC1 157 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 FTHL17Q9BXU8 183 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 XPO4Q9C0E2 1151 aaKnown RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 TSPY26PQ9H489 355 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 FAM124BQ9H5Z6 455 aaPredicted RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 ALG9Q9H6U8 611 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 STARD5Q9NSY2 213 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 IMPAD1Q9NX62 359 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 KCNN3Q9UGI6 736 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 IL19Q9UHD0 177 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 MOSPD1Q9UJG1 213 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 PURGQ9UJV8 347 aaKnown RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 KNSTRNQ9Y448 316 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 KLF2Q9Y5W3 355 aaPredicted RBP2.5□□□□□ -2.01
TARDBP-208ENST00000477447 FKBP7Q9Y680 259 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 POGZQ7Z3K3 1410 aa2.5□□□□□ -2.01
TARDBP-208ENST00000477447 RALGAPA1Q6GYQ0 2036 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 LRIT2A6NDA9 550 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 C11orf98E9PRG8 122 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 H3BMH7 237 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.49□□□□□ -2.01
TARDBP-208ENST00000477447 ECDO95905 644 aaPredicted RBP2.49□□□□□ -2.01
TARDBP-208ENST00000477447 CXCL10P02778 98 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 MT-ND3P03897 115 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 PGK2P07205 417 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 GHRP10912 638 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 PRDX6P30041 224 aa2.49□□□□□ -2.01
TARDBP-208ENST00000477447 AKT2P31751 481 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms