RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 TUBGCP3Q96CW5 907 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 AMDHD1Q96NU7 426 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 TSSK3Q96PN8 268 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 C20orf27Q9GZN8 174 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 NXF5Q9H1B4 397 aaKnown RBP12.37□□□□□ -0.43
ACTN4-205ENST00000477174 GLIPR2Q9H4G4 154 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 ZNF395Q9H8N7 513 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-205ENST00000477174 IL1RL2Q9HB29 575 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 NKIRAS1Q9NYS0 192 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 TAS2R9Q9NYW1 312 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 ERRFI1Q9UJM3 462 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-205ENST00000477174 DTX4Q9Y2E6 619 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 GPR55Q9Y2T6 319 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-205ENST00000477174 CHCHD2Q9Y6H1 151 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-205ENST00000477174 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
ACTN4-205ENST00000477174 USP9YO00507 2555 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ACOT7O00154 380 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 LRRTM2O43300 516 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 SLC19A2O60779 497 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 GLSO94925 669 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 SNX4O95219 450 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ABCB1P08183 1280 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 PRPS2P11908 318 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ABCD3P28288 659 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 RPL3P39023 403 aaKnown RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 RFC3P40938 356 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 CASP6P55212 293 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 PER3P56645 1201 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 PPIAP62937 165 aaKnown RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 PLGLB1Q02325 96 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 FOXO1Q12778 655 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 MAD2L1Q13257 205 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 RPS6KA2Q15349 733 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 TBCELQ5QJ74 424 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 AGBL2Q5U5Z8 902 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 PAOXQ6QHF9 649 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 TMEM64Q6YI46 380 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 NUP54Q7Z3B4 507 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 SPPL2CQ8IUH8 684 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ZNF781Q8N8C0 355 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 FNDC5Q8NAU1 212 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 OR7G2Q8NG99 324 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 GFM2Q969S9 779 aaKnown RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ELP4Q96EB1 424 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ZBED6CLQ96FA7 236 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 PSMG3-AS1Q96PY0 264 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 BTBD9Q96Q07 612 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 SORT1Q99523 831 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ITPAQ9BY32 194 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 TSPAN10Q9H1Z9 355 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ZDHHC11Q9H8X9 412 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ACSS1Q9NUB1 689 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 THAP1Q9NVV9 213 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ARGLU1Q9NWB6 273 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 SH3BP4Q9P0V3 963 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 C19orf53Q9UNZ5 99 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 ZNF835Q9Y2P0 537 aa12.36□□□□□ -0.43
ACTN4-205ENST00000477174 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.36□□□□□ -0.43
ACTN4-205ENST00000477174 A0A0G2JMM0 328 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 A0A1W2PPB8 328 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 A0A1W2PRS3 328 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 PINLYPA6NC86 204 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 FRG2CA6NGY1 282 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 KIR3DP1A8MWS1 328 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 G3V3Y1 287 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 AKAP10O43572 662 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 HS6ST1O60243 411 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 COQ9O75208 318 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 SKAP2O75563 359 aaPredicted RBP12.35□□□□□ -0.43
ACTN4-205ENST00000477174 PPM1BO75688 479 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 LRATO95237 230 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 LDLRP01130 860 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 PIGAP37287 484 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 FBXW4P57775 412 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 KCNJ2P63252 427 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 EMX2Q04743 252 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 BST1Q10588 318 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 CMPK2Q5EBM0 449 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 IL23RQ5VWK5 629 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 ATG16L1Q676U5 607 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 Q6ZPB1 254 aaPredicted RBP12.35□□□□□ -0.43
ACTN4-205ENST00000477174 HDXQ7Z353 690 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 TRIM42Q8IWZ5 723 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 LRRC34Q8IZ02 419 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 OR2L13Q8N349 312 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 NATD1Q8N6N6 113 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 OR5M3Q8NGP4 307 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 RAB3IL1Q8TBN0 382 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 SPPL2AQ8TCT8 520 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 DIO2Q92813 273 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 MAGED4Q96JG8 741 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 VSTM2LQ96N03 204 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 PRPF18Q99633 342 aaKnown RBP12.35□□□□□ -0.43
ACTN4-205ENST00000477174 TTTY12Q9BZ98 90 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 ANKRA2Q9H9E1 313 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 PROK2Q9HC23 129 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 ZFP64Q9NPA5 681 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 ATP6V1HQ9UI12 483 aa12.35□□□□□ -0.43
ACTN4-205ENST00000477174 CNOT11Q9UKZ1 510 aaKnown RBP12.35□□□□□ -0.43
ACTN4-205ENST00000477174 BOKQ9UMX3 212 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms