RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 ALOXE3Q9BYJ1 711 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 QRSL1Q9H0R6 528 aaKnown RBP10.79□□□□□ -0.68
NUP188-205ENST00000477069 ZNF576Q9H609 170 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 C3orf14Q9HBI5 128 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 CNOT2Q9NZN8 540 aaKnown RBP10.79□□□□□ -0.68
NUP188-205ENST00000477069 DAPP1Q9UN19 280 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 SLC9A8Q9Y2E8 581 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 PMF1-BGLAPU3KQ54 211 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 FAM221BA6H8Z2 402 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 SYT5O00445 386 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 OR10H3O60404 316 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 ADORA3P0DMS8 318 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 CD36P16671 472 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 CCR5P51681 352 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 LIMK1P53667 647 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 UGT2B15P54855 530 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 ILF3Q12906 894 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP188-205ENST00000477069 EXOSC6Q5RKV6 272 aaKnown RBP10.79□□□□□ -0.68
NUP188-205ENST00000477069 LINC00299Q6ZSB3 139 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 LRRC25Q8N386 305 aaPredicted RBP10.79□□□□□ -0.68
NUP188-205ENST00000477069 FNDC8Q8TC99 324 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 KAT2AQ92830 837 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 SLC38A4Q969I6 547 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 VMP1Q96GC9 406 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 CPNE7Q9UBL6 633 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 LIPT1Q9Y234 373 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 CORINQ9Y5Q5 1042 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 SLC22A7Q9Y694 548 aa10.79□□□□□ -0.68
NUP188-205ENST00000477069 TNFP01375 233 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CELA2BP08218 269 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 PIPP12273 146 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 BUD31P41223 144 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 VBP1P61758 197 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 NCS1P62166 190 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CHRNEQ04844 493 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ST3GAL4Q11206 333 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 FOXD4Q12950 439 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 GPAT3Q53EU6 434 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 KIAA0895LQ68EN5 471 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 MFSD12Q6NUT3 480 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 WDR53Q7Z5U6 358 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 ZBTB46Q86UZ6 589 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 OR2L13Q8N349 312 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 SLC15A4Q8N697 577 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 OR10G6Q8NH81 332 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 BAHD1Q8TBE0 780 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 ZCCHC10Q8TBK6 192 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 TRUB1Q8WWH5 349 aaKnown RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 FAM3CQ92520 227 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 RPL3LQ92901 407 aaKnown RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 HSPBAP1Q96EW2 488 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 SLC35A4Q96G79 324 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ZFYVE21Q9BQ24 234 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CDCA4Q9BXL8 241 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 IL21RQ9HBE5 538 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 MRPS2Q9Y399 296 aaKnown RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 TMEM131Q92545 1883 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CEP290O15078 2479 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 GSAPA4D1B5 854 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 TLR4O00206 839 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 TPST2O60704 377 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 PTHP01270 115 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CPN2P22792 545 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 MMP11P24347 488 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 DGKEP52429 567 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 DEFB134Q4QY38 66 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 FHL5Q5TD97 284 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 C1orf94Q6P1W5 598 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 PTCHD4Q6ZW05 846 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 USP53Q70EK8 1073 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ZER1Q7Z7L7 766 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 SHISA5Q8N114 240 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ZNF675Q8TD23 568 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 FGF11Q92914 225 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ZG16BQ96DA0 208 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 MS4A4EQ96PG1 132 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 GPA33Q99795 319 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ORAI3Q9BRQ5 295 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 PALMDQ9NP74 551 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 C11orf16Q9NQ32 467 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 GPR55Q9Y2T6 319 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 ENTPD2Q9Y5L3 495 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 C2orf74A8MZ97 194 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 NME6O75414 186 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 SOX14O95416 240 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ALDH4A1P30038 563 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
NUP188-205ENST00000477069 DOC2BQ14184 412 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 ZNF628Q5EBL2 1059 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CDC73Q6P1J9 531 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 Q6ZS52 159 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 SLC46A3Q7Z3Q1 461 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 LINC00471Q8N535 108 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 CAMKVQ8NCB2 501 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 SIMC1Q8NDZ2 872 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 SH3YL1Q96HL8 342 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 GAS2L1Q99501 681 aaPredicted RBP10.78□□□□□ -0.68
NUP188-205ENST00000477069 FNDC11Q9BVV2 318 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 LYRM4Q9HD34 91 aa10.78□□□□□ -0.68
NUP188-205ENST00000477069 AKIP1Q9NQ31 210 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms