RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 GATA5Q9BWX5 397 aaPredicted RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 EBPLQ9BY08 206 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 LRTM1Q9HBL6 345 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 TUBA8Q9NY65 449 aaPredicted RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 HEY2Q9UBP5 337 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 MRTO4Q9UKD2 239 aaKnown RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 ACAD8Q9UKU7 415 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 FIS1Q9Y3D6 152 aa9.4□□□□□ -0.9
CCM2-208ENST00000476594 POLR3HQ9Y535 204 aaPredicted RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.9
CCM2-208ENST00000476594 A0A1B0GVC2 190 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 A0A1W2PS29 197 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 TTC36A6NLP5 189 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 FOXO6A8MYZ6 492 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 NPIPA2E9PIF3 369 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 NPIPA3F8WFD2 350 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 CTIFO43310 598 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 PLOD3O60568 738 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 ZNF354AO60765 605 aaPredicted RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 WDR1O75083 606 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 SPAG7O75391 227 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 ERLIN1O75477 346 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 PDE9AO76083 593 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 CLDN14O95500 239 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 CLPSP04118 112 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 DRD5P21918 477 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 IL12BP29460 328 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 PTGER4P35408 488 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 NCBP2P52298 156 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCM2-208ENST00000476594 PSMD4P55036 377 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 FOXA1P55317 472 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 RAE1P78406 368 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 FOXO1Q12778 655 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 SNTA1Q13424 505 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 EFR3AQ14156 821 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 EXOSC7Q15024 291 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 CEBPEQ15744 281 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 ZNF628Q5EBL2 1059 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 NOXRED1Q6NXP6 359 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 SLC30A6Q6NXT4 461 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 TMEM81Q6P7N7 255 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 FAM111BQ6SJ93 734 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 TRILQ7L0X0 811 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 R3HCC1LQ7Z5L2 792 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 TICAM1Q8IUC6 712 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 DDIASQ8IXT1 998 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 OR9A2Q8NGT5 310 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 SPPL2AQ8TCT8 520 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 RND1Q92730 232 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 C11orf24Q96F05 449 aaPredicted RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 PPP3R2Q96LZ3 170 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 ZNF681Q96N22 645 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 RILPQ96NA2 401 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 OSBPL11Q9BXB4 747 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 ITPAQ9BY32 194 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 PARD6BQ9BYG5 372 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 NXF5Q9H1B4 397 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 ZNF703Q9H7S9 590 aaPredicted RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 C3orf14Q9HBI5 128 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 HHATLQ9HCP6 504 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 SH2D2AQ9NP31 389 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 ACKR4Q9NPB9 350 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 DDX18Q9NVP1 670 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 TAS2R7Q9NYW3 318 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 KLRF1Q9NZS2 232 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCM2-208ENST00000476594 ZNF639Q9UID6 485 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 CNOT11Q9UKZ1 510 aaKnown RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 OR10H1Q9Y4A9 318 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 PCDHGB3Q9Y5G1 929 aa9.39□□□□□ -0.91
CCM2-208ENST00000476594 V9GYY5 206 aaPredicted RBP9.39□□□□□ -0.91
CCM2-208ENST00000476594 A0A087WV62 115 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 A0A0G2JMM0 328 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 A0A1W2PPB8 328 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 A0A1W2PRS3 328 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 PINLYPA6NC86 204 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 KIR3DP1A8MWS1 328 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 TO15178 435 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 TM9SF1O15321 606 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 PDPK1O15530 556 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 ERN1O75460 977 aaKnown RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 CBX7O95931 251 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 FGF4P08620 206 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 IFI6P09912 130 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 COX6B1P14854 86 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 PCSK2P16519 638 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 S1PR1P21453 382 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 HTR1EP28566 365 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 CHRNB4P30926 498 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 GPC1P35052 558 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 DCTP40126 519 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 CASP3P42574 277 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 CLK3P49761 638 aaKnown RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 FBXW4P57775 412 aa9.38□□□□□ -0.91
CCM2-208ENST00000476594 RPL38P63173 70 aaKnown RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 MRPS35P82673 323 aaKnown RBP9.38□□□□□ -0.91
CCM2-208ENST00000476594 ZNF155Q12901 538 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms