RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 OR6Y1Q8NGX8 325 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 SPPL2AQ8TCT8 520 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 METTL2AQ96IZ6 378 aaKnown RBP19.44■□□□□ 0.7
LIME1-204ENST00000476183 EGLN2Q96KS0 407 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 ZFP64Q9NPA5 681 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 GIMAP4Q9NUV9 329 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 C1orf109Q9NX04 203 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 TRAF6Q9Y4K3 522 aa19.44■□□□□ 0.7
LIME1-204ENST00000476183 ATP6AP2A0A1C7CYW4 349 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 CAPN14A8MX76 684 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 MYO1GB0I1T2 1018 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 TP53I11O14683 189 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 RGS16O15492 202 aaPredicted RBP19.43■□□□□ 0.7
LIME1-204ENST00000476183 RGS14O43566 566 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 ATP6AP2O75787 350 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 IGHG3P01860 377 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 TPOP07202 933 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 NRG3P56975 720 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 ZNF787Q6DD87 383 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 DESI1Q6ICB0 168 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 ZNF808Q8N4W9 903 aaPredicted RBP19.43■□□□□ 0.7
LIME1-204ENST00000476183 OR7G2Q8NG99 324 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 DIO2Q92813 273 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 LCORQ96JN0 433 aaPredicted RBP19.43■□□□□ 0.7
LIME1-204ENST00000476183 FCRL1Q96LA6 429 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 BBS4Q96RK4 519 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 ZNF703Q9H7S9 590 aaPredicted RBP19.43■□□□□ 0.7
LIME1-204ENST00000476183 TAS2R7Q9NYW3 318 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 SENP1Q9P0U3 644 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 PRODH2Q9UF12 536 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 WBP11Q9Y2W2 641 aaKnown RBP19.43■□□□□ 0.7
LIME1-204ENST00000476183 FREM3P0C091 2139 aa19.43■□□□□ 0.7
LIME1-204ENST00000476183 ANKRD33BA6NCL7 494 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 TRIM3O75382 744 aaPredicted RBP19.42■□□□□ 0.7
LIME1-204ENST00000476183 ABCB1P08183 1280 aaPredicted RBP19.42■□□□□ 0.7
LIME1-204ENST00000476183 DCTP40126 519 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 TMED10P49755 219 aaKnown RBP19.42■□□□□ 0.7
LIME1-204ENST00000476183 RFTN2Q52LD8 501 aaPredicted RBP19.42■□□□□ 0.7
LIME1-204ENST00000476183 EMC4Q5J8M3 183 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 CES4AQ5XG92 561 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 RPTNQ6XPR3 784 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 TRILQ7L0X0 811 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 EXOC3L1Q86VI1 746 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 FAM9CQ8IZT9 166 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 CLYBLQ8N0X4 340 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 AGR3Q8TD06 166 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 TWIST2Q8WVJ9 160 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 ERP27Q96DN0 273 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 HSPBAP1Q96EW2 488 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 PKNOX2Q96KN3 472 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 ZIM3Q96PE6 472 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 DMRTA2Q96SC8 542 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 DOHHQ9BU89 302 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 MIEF1Q9NQG6 463 aa19.42■□□□□ 0.7
LIME1-204ENST00000476183 BOKQ9UMX3 212 aaPredicted RBP19.42■□□□□ 0.7
LIME1-204ENST00000476183 GPR55Q9Y2T6 319 aaPredicted RBP19.42■□□□□ 0.7
LIME1-204ENST00000476183 A0A1B0GVC2 190 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 NPIPA2E9PIF3 369 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 E9PLN8 166 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 NPIPA3F8WFD2 350 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 PIP5K1BO14986 540 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 LSM1O15116 133 aaKnown RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 ACOX3O15254 700 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 CTIFO43310 598 aaKnown RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 PLOD3O60568 738 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 PPM1BO75688 479 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 CHEK2O96017 543 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 JUNP05412 331 aaKnown RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 NEFHP12036 1026 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 DRD5P21918 477 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 MPIP34949 423 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 PPICP45877 212 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 NCBP2P52298 156 aaKnown RBP eCLIP19.41■□□□□ 0.72e-18■■□□□ 12.4
LIME1-204ENST00000476183 DCAF7P61962 342 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 RPL38P63173 70 aaKnown RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 SLC10A1Q14973 349 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 CDSNQ15517 529 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 TNFAIP8L3Q5GJ75 292 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 SH2D4BQ5SQS7 431 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 CEP85LQ5SZL2 805 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 PAOXQ6QHF9 649 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 IKBIPQ70UQ0 350 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 HGDQ93099 445 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 GFM2Q969S9 779 aaKnown RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 NTNG2Q96CW9 530 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 OMA1Q96E52 524 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 JSRP1Q96MG2 331 aaPredicted RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 VSTM2LQ96N03 204 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 RILPQ96NA2 401 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 SECISBP2Q96T21 854 aaKnown RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 VKORC1Q9BQB6 163 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 GLIPR2Q9H4G4 154 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 EML4Q9HC35 981 aaKnown RBP19.41■□□□□ 0.7
LIME1-204ENST00000476183 TNFRSF10DQ9UBN6 386 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 ZDHHC2Q9UIJ5 367 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 CACNA1DQ01668 2161 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 CACNA1CQ13936 2221 aa19.41■□□□□ 0.7
LIME1-204ENST00000476183 FRG2CA6NGY1 282 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 TO15178 435 aa19.4■□□□□ 0.7
LIME1-204ENST00000476183 BCAS2O75934 225 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms