RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TTC26A0AVF1 554 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 MTMR11A4FU01 709 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 WASHC1A8K0Z3 465 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 FOXE1O00358 373 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ABCD4O14678 606 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 POLR2DO15514 142 aaKnown RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SYNGR3O43761 229 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 DFNA5O60443 496 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 GLRA3O75311 464 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 STK17BO94768 372 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SLITRK3O94933 977 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 OAZ2O95190 189 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 GP1BBP13224 206 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CPN1P15169 458 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CA6P23280 308 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CCKBRP32239 447 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 RDXP35241 583 aaKnown RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 MAGEA5P43359 124 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 MAGEA8P43361 318 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 GAS1P54826 345 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 DCDC1P59894 354 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 EIF3EP60228 445 aaKnown RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 NAAAQ02083 359 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ELAVL3Q14576 367 aaKnown RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 KIR2DS3Q14952 304 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ZSWIM7Q19AV6 140 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF260Q3ZCT1 412 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 BEND6Q5SZJ8 279 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 DMKNQ6E0U4 476 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 STEAP1BQ6NZ63 245 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF730Q6ZMV8 503 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 KCTD8Q6ZWB6 473 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CREB3L2Q70SY1 520 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CENPQQ7L2Z9 268 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 C1QL2Q7Z5L3 287 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ACOT1Q86TX2 421 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 BIVMQ86UB2 503 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 C17orf64Q86WR6 236 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SLC38A6Q8IZM9 456 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 GPC2Q8N158 579 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF441Q8N8Z8 693 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ZNF383Q8NA42 475 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 OR5AU1Q8NGC0 362 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 KCNG3Q8TAE7 436 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 TMEM143Q96AN5 459 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 MCUR1Q96AQ8 359 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SLC25A36Q96CQ1 311 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SLC47A1Q96FL8 570 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ELMO2Q96JJ3 720 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 AMDHD1Q96NU7 426 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 RHNO1Q9BSD3 238 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CHRDL1Q9BU40 450 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 TSSK1BQ9BXA7 367 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 RAB11FIP5Q9BXF6 653 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SHARPINQ9H0F6 387 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CXXC4Q9H2H0 198 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 GAREM1Q9H706 876 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 LRRC4Q9HBW1 653 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SLC25A19Q9HC21 320 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 NEK6Q9HC98 313 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 UFSP2Q9NUQ7 469 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 SLC2A8Q9NY64 477 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 MAN1B1Q9UKM7 699 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 PRDM4Q9UKN5 801 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 IKZF3Q9UKT9 509 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 TRAF3IP3Q9Y228 551 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 RNF115Q9Y4L5 304 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 KLF2Q9Y5W3 355 aaPredicted RBP3.72□□□□□ -1.81
VPS13D-207ENST00000476169 MAD1L1Q9Y6D9 718 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 ADAMTS12P58397 1594 aa3.72□□□□□ -1.81
VPS13D-207ENST00000476169 CGNL1Q0VF96 1302 aa3.71□□□□□ -1.81
VPS13D-207ENST00000476169 A0A1B0GVL5 298 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ESYT2A0FGR8 921 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SERINC4A6NH21 518 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SHISA7A6NL88 538 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 TMCO5BA8MYB1 307 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 TCP11X1B4DZS4 312 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SUPT3HB4E1H0 165 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 TCP10L2B9ZVM9 353 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CCSO14618 274 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ALOX15BO15296 676 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 STX7O15400 261 aaKnown RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SPOPO43791 374 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CTSVO60911 334 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 N4BP1O75113 896 aaKnown RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CDH16O75309 829 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SAP30O75446 220 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 MTRF1O75570 445 aaKnown RBP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PAHP00439 452 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 CAPN1P07384 714 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 SLC35G4P0C7Q5 338 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 OR8G3PP0DMU2 310 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 ANXA3P12429 323 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 DAOP14920 347 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 FOSL2P15408 326 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 NCK1P16333 377 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 GLRA1P23415 457 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 PTBP1P26599 531 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS13D-207ENST00000476169 NF2P35240 595 aa3.71□□□□□ -1.82
VPS13D-207ENST00000476169 RFC2P35250 354 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms