RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TNRC6AQ8NDV7 1962 aaKnown RBP20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 C2orf92A0A1B0GVN3 265 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 MKRN2OSH3BPM6 223 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 RFXANKO14593 260 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 SNRPB2P08579 225 aaKnown RBP20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 SOAT1P35610 550 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 GAB1Q13480 694 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 SPDYE7PQ495Y7 208 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 ACER2Q5QJU3 275 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 ISLR2Q6UXK2 745 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 C16orf47Q6ZP98 133 aaPredicted RBP20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 CCDC197Q8NCU1 140 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 C17orf47Q8NEP4 570 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 OR56A1Q8NGH5 318 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 BCAS4Q8TDM0 211 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 MOAP1Q96BY2 351 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 SMAD5Q99717 465 aaKnown RBP20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 TEKT2Q9UIF3 430 aa20.54■□□□□ 0.88
MCF2L2-209ENST00000475664 RNF103-CHMP3A0A140T963 221 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 NDUFAB1O14561 156 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 UQCRC2P22695 453 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 PTPN6P29350 595 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 TRPC1P48995 793 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 PRKAG1P54619 331 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 ZNF155Q12901 538 aaPredicted RBP20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 MFAP5Q13361 173 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 MAPRE2Q15555 327 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 MEP1AQ16819 746 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 PAGE3Q5JUK9 113 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 ABHD17BQ5VST6 288 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 DNAJC14Q6Y2X3 702 aaPredicted RBP20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 SZRD1Q7Z422 152 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 CLEC4FQ8N1N0 589 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 OR5AK3PQ8NH89 298 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 HOXB13Q92826 284 aaPredicted RBP20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 TP53INP1Q96A56 240 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 ARHGAP9Q9BRR9 750 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 SLC6A13Q9NSD5 602 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 VPS4AQ9UN37 437 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 NDUFAF1Q9Y375 327 aa20.53■□□□□ 0.88
MCF2L2-209ENST00000475664 WWP2O00308 870 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 DCTN3O75935 186 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 ALPPP05187 535 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 GSNP06396 782 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 FAM87AP0C7U9 286 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 ZCCHC18P0CG32 403 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 HOXB9P17482 250 aaPredicted RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 PPICP45877 212 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 KCNAB2Q13303 367 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 TP53BP2Q13625 1128 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 EXOSC6Q5RKV6 272 aaKnown RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 C6orf10Q5SRN2 563 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 HLA-DQA1Q5Y7H0 255 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 MFSD12Q6NUT3 480 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 IGFL2Q6UWQ7 119 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 LINC00696Q6ZRV3 163 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 SNX32Q86XE0 403 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 TREML1Q86YW5 311 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 BEST3Q8N1M1 668 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 ABHD17AQ96GS6 310 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 BTBD9Q96Q07 612 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 PHF12Q96QT6 1004 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 LMF1Q96S06 567 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 LMF2Q9BU23 707 aaKnown RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 PAIP1Q9H074 479 aaKnown RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 NXF5Q9H1B4 397 aaKnown RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 ADNPQ9H2P0 1102 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 EPS8L2Q9H6S3 715 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 ZBTB20Q9HC78 741 aaPredicted RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 EQTNQ9NQ60 294 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 GPATCH2Q9NW75 528 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 TUBD1Q9UJT1 453 aa20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 LEF1Q9UJU2 399 aaPredicted RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 GPR55Q9Y2T6 319 aaPredicted RBP20.52■□□□□ 0.88
MCF2L2-209ENST00000475664 A0A096LPI6 279 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 ANGPT2O15123 496 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 ZNF354AO60765 605 aaPredicted RBP20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 ERN1O75460 977 aaKnown RBP20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 ITGA10O75578 1167 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 OR2J2O76002 312 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 NADKO95544 446 aaPredicted RBP20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 CT45A8P0DMV1 189 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 CT45A9P0DMV2 189 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 DRD5P21918 477 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 MAP3K8P41279 467 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 DCAF7P61962 342 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 CT45A2Q5DJT8 189 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 PIGGQ5H8A4 983 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 LRIF1Q5T3J3 769 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 SAXO2Q658L1 398 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 BHLHB9Q6PI77 547 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 NPSR1Q6W5P4 371 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 ZNF621Q6ZSS3 439 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 RETREG3Q86VR2 466 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 DPP10Q8N608 796 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 TRIML2Q8N7C3 387 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 LCORQ96JN0 433 aaPredicted RBP20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 LRRC37BQ96QE4 947 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 RASL10BQ96S79 203 aa20.51■□□□□ 0.87
MCF2L2-209ENST00000475664 SLC35A5Q9BS91 424 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms