RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 C9orf16Q9BUW7 83 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 BTBD2Q9BX70 525 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 BCL2L10Q9HD36 194 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 IL1RAPQ9NPH3 570 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 NECTIN3Q9NQS3 549 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 C8orf4Q9NR00 106 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 EXD2Q9NVH0 621 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 OCIAD1Q9NX40 245 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 GIN1Q9NXP7 522 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 CNOT11Q9UKZ1 510 aaKnown RBP12.83□□□□□ -0.36
TRAF4-210ENST00000475329 BAG5Q9UL15 447 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 LRRC42Q9Y546 428 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 CLDN16Q9Y5I7 305 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 NINQ8N4C6 2090 aa12.83□□□□□ -0.36
TRAF4-210ENST00000475329 A0A0G2JPF8 293 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 SYNDIG1LA6NDD5 238 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 HNRNPCL2B2RXH8 293 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 HNRNPCL3B7ZW38 293 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 GNGT2O14610 69 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 LRP3O75074 770 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 SERPINB7O75635 380 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 PRSS23O95084 383 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 CBX7O95931 251 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 IFNA16P05015 189 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 CHRM4P08173 479 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 ALOX5P09917 674 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 HNRNPCL4P0DMR1 293 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 ACP2P11117 423 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 FGF5P12034 268 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 ETS2P15036 469 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 CCKBRP32239 447 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 PDX1P52945 283 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 AQP4P55087 323 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 KCNJ10P78508 379 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 HPCAP84074 193 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 NHLH1Q02575 133 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF155Q12901 538 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-210ENST00000475329 CSRP2Q16527 193 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 MINDY4Q4G0A6 757 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 EXOSC6Q5RKV6 272 aaKnown RBP12.82□□□□□ -0.36
TRAF4-210ENST00000475329 PWWP2BQ6NUJ5 590 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 COX15Q7KZN9 410 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 ARMC8Q8IUR7 673 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 PACRGLQ8N7B6 248 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 SIMC1Q8NDZ2 872 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 RASSF5Q8WWW0 418 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 GEMIN6Q8WXD5 167 aaKnown RBP12.82□□□□□ -0.36
TRAF4-210ENST00000475329 SLC9A6Q92581 669 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 CDS1Q92903 461 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 TRNT1Q96Q11 434 aaKnown RBP12.82□□□□□ -0.36
TRAF4-210ENST00000475329 STACQ99469 402 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 CDC6Q99741 560 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 SPATA5L1Q9BVQ7 753 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 PIGUQ9H490 435 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 RUBCNLQ9H714 662 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 SEMA4GQ9NTN9 838 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 NCDNQ9UBB6 729 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF639Q9UID6 485 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 OAZ3Q9UMX2 235 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 GPC6Q9Y625 555 aaPredicted RBP12.82□□□□□ -0.36
TRAF4-210ENST00000475329 KIF26BQ2KJY2 2108 aa12.82□□□□□ -0.36
TRAF4-210ENST00000475329 IGKV3D-11A0A0A0MRZ8 115 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 TMEM229AB2RXF0 380 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 hCG_2039718K7EN88 272 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 PRAMEF2O60811 474 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 CBFA2T3O75081 653 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 SOX30O94993 753 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 MFN2O95140 757 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 TIAF1O95411 115 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 ACADSP16219 412 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF23P17027 643 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 CD247P20963 164 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 HSPA13P48723 471 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 VLDLRP98155 873 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 RHAGQ02094 409 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 ILKQ13418 452 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 DUSP5Q16690 384 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 CMPK2Q5EBM0 449 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 HEPHL1Q6MZM0 1159 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 ZBTB49Q6ZSB9 765 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 PIWIL3Q7Z3Z3 882 aaKnown RBP12.81□□□□□ -0.36
TRAF4-210ENST00000475329 WDR53Q7Z5U6 358 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-210ENST00000475329 EPHX4Q8IUS5 362 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 GALNT4Q8N4A0 578 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 BMPERQ8N8U9 685 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 SLC16A11Q8NCK7 471 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 PRSS33Q8NF86 280 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 OR52R1Q8NGF1 315 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 SPPL2AQ8TCT8 520 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 TMBIM1Q969X1 311 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 SLC35A4Q96G79 324 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 COL21A1Q96P44 957 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 CNPPD1Q9BV87 410 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 TGIF2Q9GZN2 237 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 COQ10BQ9H8M1 238 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 NTN4Q9HB63 628 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 DUSP22Q9NRW4 184 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 RXFP3Q9NSD7 469 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 C14orf105Q9NVL8 296 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms