RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 UGT3A2Q3SY77 523 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 BCL2L15Q5TBC7 163 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 ZNF367Q7RTV3 350 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 UMODL1-AS1Q8N2C9 162 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 SAMD11Q96NU1 681 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 TAS2R38P59533 333 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 C6orf141Q5SZD1 244 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 TOR1AIP2Q8NFQ8 470 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 OR5T1Q8NG75 326 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 BORCS6Q96GS4 357 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 HAPLN2Q9GZV7 340 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 POT1Q9NUX5 634 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 FAM118AQ9NWS6 357 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 H3BQ06 376 aaPredicted RBP10.44□□□□□ -0.74
VAPB-204ENST00000475243 ATP6V1G1O75348 118 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 HTR1EP28566 365 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 SOX3P41225 446 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 UBE2NP61088 152 aaKnown RBP10.44□□□□□ -0.74
VAPB-204ENST00000475243 NPRL3Q12980 569 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 FADDQ13158 208 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 MFSD13AQ14CX5 517 aa10.44□□□□□ -0.74
VAPB-204ENST00000475243 SLC19A2O60779 497 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 EEDO75530 441 aaKnown RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 NDUFV2P19404 249 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RBMS1P29558 406 aaKnown RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 ERVPABLB-1P60509 514 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 EFR3AQ14156 821 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RHEBQ15382 184 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 ASRGL1Q7L266 308 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 GALNT6Q8NCL4 622 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RPLP0P6Q8NHW5 317 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RBM24Q9BX46 236 aaKnown RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 RARRES3Q9UL19 164 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 NFS1Q9Y697 457 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RGS9O75916 674 aaPredicted RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 IFNGR1P15260 489 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 MAOBP27338 520 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RSU1Q15404 277 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 SPHARQ15513 63 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 ZNF852Q6ZMS4 543 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 CENPSQ8N2Z9 138 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 OR52N2Q8NGI0 321 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 OR5AR1Q8NGP9 310 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 HDAC2Q92769 488 aaKnown RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 ECHDC3Q96DC8 303 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 SGCZQ96LD1 299 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 PHOX2BQ99453 314 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 CPEB1Q9BZB8 566 aaKnown RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 KATNBL1Q9H079 304 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 INMT-MINDY4F8WBC2 141 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 M0R233 179 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 SLC16A8O95907 504 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 ARSAP15289 507 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 MOGQ16653 247 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 LIX1LQ8IVB5 337 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 TEX26Q8N6G2 289 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 SHISA4Q96DD7 197 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 GPR83Q9NYM4 423 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 KNL1Q8NG31 2342 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 GXYLT2A0PJZ3 443 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 IFNA2P01563 188 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 CA3P07451 260 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 GSTM2P28161 218 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 HOXA11P31270 313 aaPredicted RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 PIGGQ5H8A4 983 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 HHIPQ96QV1 700 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 MACROD1Q9BQ69 325 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 F5H0A9 414 aaPredicted RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 FMO6PO60774 539 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 MLC1Q15049 377 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 SYT14Q8NB59 555 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 FAM3CQ92520 227 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 FEVQ99581 238 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 KNDC1Q76NI1 1749 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 PPP1R3DO95685 299 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 SQSTM1Q13501 440 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 NPRL2Q8WTW4 380 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 MGLLQ99685 303 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 URM1Q9BTM9 101 aaKnown RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 ZNF175Q9Y473 711 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 OPN1LWP04000 364 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 HNRNPA1P09651 372 aaKnown RBP eCLIP10.43□□□□□ -0.74
VAPB-204ENST00000475243 GRIN2CQ14957 1233 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 SPATS1Q496A3 300 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 FAM205BPQ63HN1 556 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RPL13AP3Q6NVV1 102 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 RCBTB1Q8NDN9 531 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 OR5L2Q8NGL0 311 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 OR5B2Q96R09 309 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 CNN2Q99439 309 aaKnown RBP10.43□□□□□ -0.74
VAPB-204ENST00000475243 ZNF559Q9BR84 538 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 DNTTIP1Q9H147 329 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 GPRC5BQ9NZH0 403 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 PCDH10Q9P2E7 1040 aa10.43□□□□□ -0.74
VAPB-204ENST00000475243 A8MVJ9 347 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 SYPP08247 313 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 CD79AP11912 226 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 NPR2P20594 1047 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 AAK1Q2M2I8 961 aa10.42□□□□□ -0.74
VAPB-204ENST00000475243 TMEM35AQ53FP2 167 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms