RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SHOX2O60902 331 aaPredicted RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 SLC22A3O75751 556 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 NADKO95544 446 aaPredicted RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 C6orf47O95873 294 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 LDLRP01130 860 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 COX7A2P14406 83 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 TNNI3P19429 210 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 NT5EP21589 574 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ITGA3P26006 1051 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 MPIP34949 423 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 HPCAL1P37235 193 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 MAP3K8P41279 467 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 MC3RP41968 323 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 NCBP2P52298 156 aaKnown RBP eCLIP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 MLF1P58340 268 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 HBA1P69905 142 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 RNF4P78317 190 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 SRSF11Q05519 484 aaKnown RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 MLC1Q15049 377 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 EBPQ15125 230 aaKnown RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 TLR1Q15399 786 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 GSTA3Q16772 222 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 PGS1Q32NB8 556 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 LACTB2Q53H82 288 aaPredicted RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ACER2Q5QJU3 275 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 TCTN3Q6NUS6 607 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 BLOC1S3Q6QNY0 202 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 IGFL2Q6UWQ7 119 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 TMEM107Q6UX40 140 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 LYPD8Q6UX82 237 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ACAD11Q709F0 780 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 R3HCC1LQ7Z5L2 792 aaKnown RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 PIGWQ7Z7B1 504 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ANKRD46Q86W74 232 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 SLC34A3Q8N130 599 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 OR2L13Q8N349 312 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 VWA5B2Q8N398 1253 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 CPSF7Q8N684 471 aaKnown RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 C16orf52Q8NHV5 167 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 PRR7Q8TB68 274 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 THAP3Q8WTV1 239 aaPredicted RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ADIPOR1Q96A54 375 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 VPS33AQ96AX1 596 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ELP4Q96EB1 424 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 GIMAP5Q96F15 307 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 VMP1Q96GC9 406 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 VSTM2LQ96N03 204 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 BBS4Q96RK4 519 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 SMAD5Q99717 465 aaKnown RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 SIKE1Q9BRV8 207 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 PELOQ9BRX2 385 aaKnown RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 INPP5KQ9BT40 448 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 DUSP26Q9BV47 211 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 BHLHE41Q9C0J9 482 aaPredicted RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 CXorf36Q9H7Y0 433 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 SAR1AQ9NR31 198 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ZIM2Q9NZV7 527 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 PTGFRNQ9P2B2 879 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 KLHL14Q9P2G3 628 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ADAM21Q9UKJ8 722 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 C19orf53Q9UNZ5 99 aaPredicted RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 ENTPD4Q9Y227 616 aa6.47□□□□□ -1.37
LIMD1-204ENST00000474665 PCDHGA9Q9Y5G4 932 aaKnown RBP6.47□□□□□ -1.37
LIMD1-204ENST00000474665 NCKAP5O14513 1909 aa6.46□□□□□ -1.37
LIMD1-204ENST00000474665 A0A087WV62 115 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 PRSS51A0A1B0GVH4 220 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 SYNDIG1LA6NDD5 238 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 TTLL8A6PVC2 850 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 A8MUI8 341 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 WWP2O00308 870 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ZFAND5O76080 213 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 WDPCPO95876 746 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 PGRP06401 933 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CT45A8P0DMV1 189 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CT45A9P0DMV2 189 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 TROVE2P10155 538 aaKnown RBP eCLIP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ICAM2P13598 275 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 HOXB9P17482 250 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CAPN3P20807 821 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 NTSP30990 170 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CDKN2CP42773 168 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 KIR3DL1P43629 444 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 MAN2A2P49641 1150 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ATP4BP51164 291 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CLCN2P51788 898 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 POLR2JP52435 117 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 ARFIP2P53365 341 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CLNS1AP54105 237 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 MANFP55145 182 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CORO7P57737 925 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 HSPB3Q12988 150 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 MFAP5Q13361 173 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 MRPL49Q13405 166 aaKnown RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 GAB1Q13480 694 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 RCAN2Q14206 197 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 CT45A2Q5DJT8 189 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 METTL21CQ5VZV1 264 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 JMJD6Q6NYC1 403 aaPredicted RBP6.46□□□□□ -1.38
LIMD1-204ENST00000474665 IGFL3Q6UXB1 125 aa6.46□□□□□ -1.38
LIMD1-204ENST00000474665 NPSR1Q6W5P4 371 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms