RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CYR61O00622 381 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 GALR3O60755 368 aaPredicted RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 DNAJB6O75190 326 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 ZIC2O95409 532 aaPredicted RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 ATP1B1P05026 303 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CDK1P06493 297 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 INHBBP09529 407 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CTSEP14091 401 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CPMP14384 443 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 PVRP15151 417 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 IGFBP4P22692 258 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 TLX1P31314 330 aaPredicted RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 PRKAR1BP31321 381 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 PTGER1P34995 402 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 MAP3K8P41279 467 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 MAP2K4P45985 399 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SLC15A1P46059 708 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 FASLGP48023 281 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 XKP51811 444 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 PRKAG1P54619 331 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 EMP3P54852 163 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 UGT2B15P54855 530 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SNRPGP62308 76 aaKnown RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 HHEXQ03014 270 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 COX10Q12887 443 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 AQP6Q13520 282 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 IRF3Q14653 427 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CTF1Q16619 201 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 NDUFA9Q16795 377 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 ARHGAP11BQ3KRB8 267 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 DEFB134Q4QY38 66 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 GPAT3Q53EU6 434 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 FGD3Q5JSP0 725 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 ZCCHC12Q6PEW1 402 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 DEF8Q6ZN54 512 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 OLIG3Q7RTU3 272 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SZRD1Q7Z422 152 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 TAF8Q7Z7C8 310 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 IQCHQ86VS3 1027 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 C17orf82Q86X59 251 aaPredicted RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 SFTPA2Q8IWL1 248 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CA13Q8N1Q1 262 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 AVL9Q8NBF6 648 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 MORN4Q8NDC4 146 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 TSTD1Q8NFU3 115 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 OR6T1Q8NGN1 323 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 VANGL1Q8TAA9 524 aaPredicted RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 TBC1D15Q8TC07 691 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SLC7A13Q8TCU3 470 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 ZNF675Q8TD23 568 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 ZDHHC1Q8WTX9 485 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 GGHQ92820 318 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 GTPBP3Q969Y2 492 aaKnown RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 RERGQ96A58 199 aaPredicted RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 DTNBP1Q96EV8 351 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SLC35A4Q96G79 324 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SH3GL3Q99963 347 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 YIPF4Q9BSR8 244 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 UCK2Q9BZX2 261 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CCDC90BQ9GZT6 254 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 SEMA6CQ9H3T2 930 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 ANKRD19PQ9H560 264 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 RASSF1Q9NS23 344 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 TMEM74BQ9NUR3 256 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 C2orf42Q9NWW7 574 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 HRASLS2Q9NWW9 162 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 CNOT2Q9NZN8 540 aaKnown RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 C19orf53Q9UNZ5 99 aaPredicted RBP9.2□□□□□ -0.94
USP39-214ENST00000474572 SLCO1B1Q9Y6L6 691 aa9.2□□□□□ -0.94
USP39-214ENST00000474572 LILRA5A6NI73 299 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 CLDN24A6NM45 220 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 METTL12A8MUP2 240 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 PLOD3O60568 738 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 BCAS1O75363 584 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 UGT2B17O75795 530 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 CSF2P04141 144 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 WNT1P04628 370 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 ALPPP05187 535 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 ACP2P11117 423 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 PIPP12273 146 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 NME1P15531 152 aaKnown RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 PORP16435 677 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 RPS4Y1P22090 263 aaKnown RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 CD27P26842 260 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 TGFBR2P37173 567 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 MAPK10P53779 464 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 RAB38P57729 211 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 CDC42P60953 191 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 SIM1P81133 766 aaPredicted RBP9.19□□□□□ -0.94
USP39-214ENST00000474572 CHRNEQ04844 493 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 PRTGQ2VWP7 1150 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 FAM214AQ32MH5 1076 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 ATAD3BQ5T9A4 648 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 C1orf94Q6P1W5 598 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 FRRS1Q6ZNA5 592 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 LINC00299Q6ZSB3 139 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 AHSA2Q719I0 299 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 PRSS41Q7RTY9 318 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 GJD3Q8N144 294 aa9.19□□□□□ -0.94
USP39-214ENST00000474572 CSNK1A1LQ8N752 337 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms