RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CPEB2Q7Z5Q1 589 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 PATL1Q86TB9 770 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 RAB43Q86YS6 212 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 LGI4Q8N135 537 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ENDOVQ8N8Q3 282 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 MORN4Q8NDC4 146 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 OR2Y1Q8NGV0 311 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 NFKBIDQ8NI38 313 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 GPR151Q8TDV0 419 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 RASSF5Q8WWW0 418 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 PMEPA1Q969W9 287 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 UTP4Q969X6 686 aaKnown RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 NXPE2Q96DL1 559 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 FBXL20Q96IG2 436 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF583Q96ND8 569 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 OR7D2Q96RA2 312 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM117AQ9C073 453 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 PCDHAC1Q9H158 963 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 OR10A5Q9H207 317 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 IKZF5Q9H5V7 419 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 TMEM38AQ9H6F2 299 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 A4GALTQ9NPC4 353 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 CD300AQ9UGN4 299 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 KCND3Q9UK17 655 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC13A4Q9UKG4 626 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 BAG5Q9UL15 447 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF451Q9Y4E5 1061 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 GMEB1Q9Y692 573 aa9.59□□□□□ -0.87
PRPF38A-202ENST00000474048 PCNX2A6NKB5 2137 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 KIF26BQ2KJY2 2108 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 IGKV3D-11A0A0A0MRZ8 115 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 TEX51A0A1B0GUA7 166 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 VSTM2BA6NLU5 285 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 OR6C76A6NM76 312 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 C9orf172C9J069 976 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 PEX12O00623 359 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 SERPINB7O75635 380 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 ZNF682O95780 498 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 ARAFP10398 606 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 NCK1P16333 377 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 GGT1P19440 569 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 DLSTP36957 453 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 PSMD4P55036 377 aaKnown RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 ACTR3P61158 418 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 POU6F2P78424 691 aaPredicted RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 EEF1A2Q05639 463 aaKnown RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 DNASE1L3Q13609 305 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 FAM98BQ52LJ0 330 aaKnown RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 COX20Q5RI15 118 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 LCN8Q6JVE9 175 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 MRPL14Q6P1L8 145 aaKnown RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 PAPD4Q6PIY7 484 aaKnown RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 TMPRSS7Q7RTY8 843 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 ANKRD37Q7Z713 158 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 PTRH1Q86Y79 214 aaKnown RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 SPPL2CQ8IUH8 684 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 ZZZ3Q8IYH5 903 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 EID3Q8N140 333 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 HORMAD2Q8N7B1 307 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 OR5D16Q8NGK9 328 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 BBS10Q8TAM1 723 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 MIPOL1Q8TD10 442 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC2A12Q8TD20 617 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 DOK4Q8TEW6 326 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 CT55Q8WUE5 264 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 RAB8BQ92930 207 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC46A1Q96NT5 459 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 GAL3ST4Q96RP7 486 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 STACQ99469 402 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 GPR87Q9BY21 358 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 UGT2B28Q9BY64 529 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 DENND2DQ9H6A0 471 aaPredicted RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 ARMC7Q9H6L4 198 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 FOLH1BQ9HBA9 442 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 SLC22A11Q9NSA0 550 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 FOXJ2Q9P0K8 574 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 AURKCQ9UQB9 309 aa9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 FARSAQ9Y285 508 aaKnown RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 HEMK1Q9Y5R4 338 aaPredicted RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 NUP214P35658 2090 aaPredicted RBP9.58□□□□□ -0.88
PRPF38A-202ENST00000474048 VPS13AQ96RL7 3174 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 NSG1A0A0A6YYJ2 146 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 C2orf92A0A1B0GVN3 265 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 DHRS12A0PJE2 317 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 OR2W5A6NFC9 320 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 SAGE2PA6NJ88 616 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 TGFBR3LH3BV60 316 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 HMGN4O00479 90 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 TM4SF5O14894 197 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 HS6ST1O60243 411 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 CREG1O75629 220 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 SERPINA1P01009 418 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 GPIP06744 558 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 CT62P0C5K7 136 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 UMPSP11172 480 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 AQP1P29972 269 aa9.57□□□□□ -0.88
PRPF38A-202ENST00000474048 SSTR4P31391 388 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms