RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TESCQ96BS2 214 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 SIKE1Q9BRV8 207 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 CCDC28BQ9BUN5 200 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 CCDC134Q9H6E4 229 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 C3orf14Q9HBI5 128 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 FGFR1OP2Q9NVK5 253 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 PCDHGB4Q9UN71 923 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 C19orf53Q9UNZ5 99 aaPredicted RBP11.48□□□□□ -0.57
DDX56-209ENST00000473924 DTX4Q9Y2E6 619 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 SNX8Q9Y5X2 465 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 BOD1L1Q8NFC6 3051 aa11.48□□□□□ -0.57
DDX56-209ENST00000473924 A0A0G2JND7 137 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 CAPN14A8MX76 684 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 EMC8O43402 210 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 SLC28A2O43868 658 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 ERN1O75460 977 aaKnown RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 SLC22A3O75751 556 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 NEURL1O76050 574 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 SORBS2O94875 1100 aaKnown RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 C6orf47O95873 294 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 SP1P08047 785 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 IFI6P09912 130 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 PPICP45877 212 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 TMED10P49755 219 aaKnown RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 PRR5P85299 388 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 ZNHIT3Q15649 155 aaPredicted RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 SPDYE7PQ495Y7 208 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 SPANXN4Q5MJ08 99 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 ANXA8L1Q5VT79 327 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 SLC25A25Q6KCM7 469 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 MIER2Q8N344 545 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 OR2L13Q8N349 312 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 ZNF441Q8N8Z8 693 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 Q8NA96 180 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 GLB1L3Q8NCI6 653 aaPredicted RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 FAM13CQ8NE31 585 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 C17orf47Q8NEP4 570 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 OR8J2Q8NGG1 315 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 RFWD2Q8NHY2 731 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 HSPBAP1Q96EW2 488 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 LCORQ96JN0 433 aaPredicted RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 TEX37Q96LM6 180 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 NXF5Q9H1B4 397 aaKnown RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 CLMPQ9H6B4 373 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 TRIM45Q9H8W5 580 aaPredicted RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 FOLH1BQ9HBA9 442 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 NEUROD4Q9HD90 331 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 TIMMDC1Q9NPL8 285 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 EQTNQ9NQ60 294 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 RYDENQ9NUL5 291 aaKnown RBP11.47□□□□□ -0.57
DDX56-209ENST00000473924 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 NPFFR2Q9Y5X5 522 aa11.47□□□□□ -0.57
DDX56-209ENST00000473924 CNTRLQ7Z7A1 2325 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 FRG2CA6NGY1 282 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 C9JVG2 144 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 RNASET2O00584 256 aaKnown RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 ACOX3O15254 700 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 ZNF354AO60765 605 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 NME6O75414 186 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 RASAL1O95294 804 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 NADKO95544 446 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 NCF2P19878 526 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 DRD5P21918 477 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 SOAT1P35610 550 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 KRT20P35900 424 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 MLLT10P55197 1068 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 INPP5JQ15735 1006 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 RPUSD3Q6P087 351 aaKnown RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 TMEM64Q6YI46 380 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 RTL4Q6ZR62 310 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 GALNTL5Q7Z4T8 443 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 MDGA2Q7Z553 956 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 ZNF605Q86T29 641 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 SLC44A2Q8IWA5 706 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 DND1Q8IYX4 353 aaKnown RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 PRR22Q8IZ63 422 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 CISD2Q8N5K1 135 aaKnown RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 FAM98AQ8NCA5 519 aaKnown RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 NUP43Q8NFH3 380 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 OR4A15Q8NGL6 344 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 OR5M3Q8NGP4 307 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 SPACA9Q96E40 222 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 SGCZQ96LD1 299 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 VSTM2LQ96N03 204 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 HES7Q9BYE0 225 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 EPN3Q9H201 632 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 SDR39U1Q9NRG7 319 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 ZCCHC3Q9NUD5 404 aaKnown RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 ZIM2Q9NZV7 527 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 TRIM33Q9UPN9 1127 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 GPR55Q9Y2T6 319 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 KLF13Q9Y2Y9 288 aaPredicted RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 OR10H1Q9Y4A9 318 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 PCDHGB6Q9Y5F9 930 aa11.46□□□□□ -0.57
DDX56-209ENST00000473924 COPG1Q9Y678 874 aaKnown RBP11.46□□□□□ -0.57
DDX56-209ENST00000473924 SPTA1P02549 2419 aa11.46□□□□□ -0.58
DDX56-209ENST00000473924 COL6A6A6NMZ7 2263 aa11.46□□□□□ -0.58
DDX56-209ENST00000473924 PRSS51A0A1B0GVH4 220 aa11.45□□□□□ -0.58
DDX56-209ENST00000473924 TP53I11O14683 189 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms