RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ASNA1O43681 348 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 PLOD3O60568 738 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 TBX19O60806 448 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 P04436 131 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 STSP08842 583 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 ABCD3P28288 659 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 NTSP30990 170 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 FOXO1Q12778 655 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 CMPK2Q5EBM0 449 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 AGBL2Q5U5Z8 902 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 C1QL3Q5VWW1 255 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 DESI1Q6ICB0 168 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 TMEM107Q6UX40 140 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 FAM47EQ6ZV65 393 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 FGD2Q7Z6J4 655 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 DND1Q8IYX4 353 aaKnown RBP17.42■□□□□ 0.38
PTCD3-210ENST00000473829 FBXW8Q8N3Y1 598 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 FNDC5Q8NAU1 212 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 OR52N2Q8NGI0 321 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 NUDT8Q8WV74 236 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 PPCDCQ96CD2 204 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 TUBGCP3Q96CW5 907 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 ERP27Q96DN0 273 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 ZNF764Q96H86 408 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-210ENST00000473829 LCORQ96JN0 433 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-210ENST00000473829 VSTM2LQ96N03 204 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 FAM173AQ9BQD7 235 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 TTTY12Q9BZ98 90 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 PNPOQ9NVS9 261 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 TUBA8Q9NY65 449 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-210ENST00000473829 PRODH2Q9UF12 536 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 CFL2Q9Y281 166 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-210ENST00000473829 PDPK1O15530 556 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 GLSO94925 669 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-210ENST00000473829 RPL14P50914 215 aaKnown RBP17.41■□□□□ 0.38
PTCD3-210ENST00000473829 CORO7P57737 925 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 PTGR1Q14914 329 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 RPS6KA2Q15349 733 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 TTMPQ5BVD1 217 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 IL23RQ5VWK5 629 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 SLC22A10Q63ZE4 541 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 BICRALQ6AI39 1079 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 NPSR1Q6W5P4 371 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 GK5Q6ZS86 529 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 ZNF551Q7Z340 670 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-210ENST00000473829 BTBD9Q96Q07 612 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 FOLH1BQ9HBA9 442 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 SLC5A6Q9Y289 635 aa17.41■□□□□ 0.38
PTCD3-210ENST00000473829 GPR55Q9Y2T6 319 aaPredicted RBP17.41■□□□□ 0.38
PTCD3-210ENST00000473829 A0A087WV62 115 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 FRG2CA6NGY1 282 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 SCAMP2O15127 329 aaKnown RBP17.4■□□□□ 0.38
PTCD3-210ENST00000473829 BCAS2O75934 225 aaPredicted RBP17.4■□□□□ 0.38
PTCD3-210ENST00000473829 PSMG1O95456 288 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 LDLRP01130 860 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 CT45A8P0DMV1 189 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 CT45A9P0DMV2 189 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 EFNA1P20827 205 aaPredicted RBP17.4■□□□□ 0.38
PTCD3-210ENST00000473829 DRD5P21918 477 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 MAPK1P28482 360 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 FRKP42685 505 aaPredicted RBP17.4■□□□□ 0.38
PTCD3-210ENST00000473829 PPICP45877 212 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 ASMTP46597 345 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 NRG3P56975 720 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 PPIAP62937 165 aaKnown RBP17.4■□□□□ 0.38
PTCD3-210ENST00000473829 PLGLB1Q02325 96 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 HSPB3Q12988 150 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 C4orf17Q53FE4 359 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 KRTCAP3Q53RY4 240 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 CT45A2Q5DJT8 189 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 OR7A2PQ8NGA2 310 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 SSC4DQ8WTU2 575 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 OMA1Q96E52 524 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 RYDENQ9NUL5 291 aaKnown RBP17.4■□□□□ 0.38
PTCD3-210ENST00000473829 NKIRAS1Q9NYS0 192 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 SH3BP4Q9P0V3 963 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 HECTD1Q9ULT8 2610 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 NINQ8N4C6 2090 aa17.4■□□□□ 0.38
PTCD3-210ENST00000473829 LRRC3CA6NJW4 275 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 UPK1AO00322 258 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 PLOD2O00469 737 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 TO15178 435 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 ACOX3O15254 700 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 LRRTM2O43300 516 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 SLC19A2O60779 497 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 SNNO75324 88 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 ERN1O75460 977 aaKnown RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 PPM1BO75688 479 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 SNUPNO95149 360 aaKnown RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 ABCB1P08183 1280 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 CDK9P50750 372 aaKnown RBP17.39■□□□□ 0.37
PTCD3-210ENST00000473829 PLCXD2Q0VAA5 305 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 GHDCQ8N2G8 530 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 OR2L13Q8N349 312 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 TMEM251Q8N6I4 163 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 KRTCAP2Q8N6L1 136 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 SPPL2AQ8TCT8 520 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 HGDQ93099 445 aa17.39■□□□□ 0.37
PTCD3-210ENST00000473829 ELP4Q96EB1 424 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms