RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ARG2P78540 354 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 RCAN2Q14206 197 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 SPATA21Q7Z572 469 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 CPLX4Q7Z7G2 160 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 CLECL1Q8IZS7 167 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 CPSF7Q8N684 471 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 NUP43Q8NFH3 380 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 VSTM2LQ96N03 204 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 MS4A4EQ96PG1 132 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 BTBD9Q96Q07 612 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 OR52E6Q96RD3 313 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 UTP23Q9BRU9 249 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 ITPAQ9BY32 194 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 CXorf36Q9H7Y0 433 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 LIN28AQ9H9Z2 209 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 FOLH1BQ9HBA9 442 aa17.57■□□□□ 0.4
CTDSP1-207ENST00000473420 NUP214P35658 2090 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 C9JVG2 144 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 NADKO95544 446 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 DRD5P21918 477 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 HLCSP50747 726 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 KCNK10P57789 538 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 TUBA3CQ13748 450 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 TUBA3EQ6PEY2 450 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 BLOC1S3Q6QNY0 202 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 OPN5Q6U736 354 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 DND1Q8IYX4 353 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 TAGAPQ8N103 731 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 OR56A1Q8NGH5 318 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 OR4A15Q8NGL6 344 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 GOT1L1Q8NHS2 421 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 FAM120BQ96EK7 910 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 HSPBAP1Q96EW2 488 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 LCORQ96JN0 433 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 ELAC2Q9BQ52 826 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 RMND5AQ9H871 391 aa17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 GPR55Q9Y2T6 319 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-207ENST00000473420 FRG2CA6NGY1 282 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 TO15178 435 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 ACOX3O15254 700 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 SNX3O60493 162 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 ERN1O75460 977 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 ABCB1P08183 1280 aaPredicted RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 CD97P48960 835 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 CCT3P49368 545 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 CYB561P49447 251 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 TNFSF10P50591 281 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 NR0B1P51843 470 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 NRG3P56975 720 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 ZNF155Q12901 538 aaPredicted RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 KLRB1Q12918 225 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 ZCCHC12Q6PEW1 402 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 BHLHB9Q6PI77 547 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 C16orf47Q6ZP98 133 aaPredicted RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 Q6ZS92 163 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 FUNDC1Q8IVP5 155 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 TMEM156Q8N614 296 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 HORMAD2Q8N7B1 307 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 RBMXL3Q8N7X1 1067 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 ASB15Q8WXK1 588 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 SLC39A7Q92504 469 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 HOXB13Q92826 284 aaPredicted RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 MAGED4Q96JG8 741 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 LMF2Q9BU23 707 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 TRIM4Q9C037 500 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 NXF5Q9H1B4 397 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 ZCCHC3Q9NUD5 404 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 PLA2G3Q9NZ20 509 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 CCDC167Q9P0B6 97 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 SNX8Q9Y5X2 465 aa17.55■□□□□ 0.4
CTDSP1-207ENST00000473420 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 SHOX2O60902 331 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 CD96P40200 585 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 SOX3P41225 446 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 SF3A3Q12874 501 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■□□ 17.8
CTDSP1-207ENST00000473420 TLR1Q15399 786 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 ZNHIT3Q15649 155 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 SPDYE7PQ495Y7 208 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 VPS26BQ4G0F5 336 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 TIGD2Q4W5G0 525 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 AGKQ53H12 422 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 ANKRD46Q86W74 232 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 CDRT4Q8N9R6 151 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 MDS2Q8NDY4 140 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 TSPEARQ8WU66 669 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 GIMAP5Q96F15 307 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 FAM107BQ9H098 131 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 EPN3Q9H201 632 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 LRFN1Q9P244 771 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 ADAM21Q9UKJ8 722 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 B3GNT3Q9Y2A9 372 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 PCDHGB6Q9Y5F9 930 aa17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 TLN1Q9Y490 2541 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-207ENST00000473420 TRAV17A0A0B4J275 112 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 CCDC154A6NI56 674 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 A8MVJ9 347 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 CAPN14A8MX76 684 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 ZNF354AO60765 605 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 CPSF4O95639 269 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 FBXO45P0C2W1 286 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms