RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZFP41Q8N8Y5 198 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 ENKURQ8TC29 256 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 C17orf50Q8WW18 174 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 PRRG3Q9BZD7 231 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 AICDAQ9GZX7 198 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 OR51I1Q9H343 314 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 MAN2C1Q9NTJ4 1040 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 COMMD3Q9UBI1 195 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 TRPC4Q9UBN4 977 aa19.91■□□□□ 0.78
COL18A1-207ENST00000473212 APEX1P27695 318 aaKnown RBP19.9■□□□□ 0.78
COL18A1-207ENST00000473212 CD79BP40259 229 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 VIPR2P41587 438 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 DBPQ10586 325 aaPredicted RBP19.9■□□□□ 0.78
COL18A1-207ENST00000473212 COX10Q12887 443 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 GPR19Q15760 415 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 KLHL22Q53GT1 634 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 C3orf38Q5JPI3 329 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 LCTLQ6UWM7 567 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 GLCCI1Q86VQ1 547 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 C17orf64Q86WR6 236 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 TP53I13Q8NBR0 393 aaPredicted RBP19.9■□□□□ 0.78
COL18A1-207ENST00000473212 RNFT2Q96EX2 444 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 EGLN3Q9H6Z9 239 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 MALT1Q9UDY8 824 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 SF3B6Q9Y3B4 125 aaKnown RBP19.9■□□□□ 0.78
COL18A1-207ENST00000473212 VCANP13611 3396 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 LTBP2Q14767 1821 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 FRS3O43559 492 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 NR2F1P10589 423 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 CDK5Q00535 292 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 QPRTQ15274 297 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 ZNF628Q5EBL2 1059 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 SLC25A30Q5SVS4 291 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 C9orf64Q5T6V5 341 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 PAMR1Q6UXH9 720 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 ZNF730Q6ZMV8 503 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 ABI3BPQ7Z7G0 1075 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 OR6T1Q8NGN1 323 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 SLC9A6Q92581 669 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 FGF11Q92914 225 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 PPP1R16AQ96I34 528 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 P2RX2Q9UBL9 471 aa19.9■□□□□ 0.78
COL18A1-207ENST00000473212 KIAA0100Q14667 2235 aaKnown RBP19.89■□□□□ 0.78
COL18A1-207ENST00000473212 STK25O00506 426 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 SLC30A4O14863 429 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 ADRB3P13945 408 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 PTNP21246 168 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 EFNB1P98172 346 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 FABP5Q01469 135 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 TYW3Q6IPR3 259 aaKnown RBP19.89■□□□□ 0.77
COL18A1-207ENST00000473212 CD300LDQ6UXZ3 194 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 KIF18BQ86Y91 864 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 RAD51AP1Q96B01 352 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 ZCCHC2Q9C0B9 1178 aaKnown RBP19.89■□□□□ 0.77
COL18A1-207ENST00000473212 SLA2Q9H6Q3 261 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 TRPM6Q9BX84 2022 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 PRKCAP17252 672 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 MLLT3P42568 568 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-207ENST00000473212 MAN2A2P49641 1150 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 ST8SIA6P61647 398 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 MAP4K2Q12851 820 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 FNDC3BQ53EP0 1204 aaKnown RBP19.89■□□□□ 0.77
COL18A1-207ENST00000473212 YIF1BQ5BJH7 314 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 QSOX2Q6ZRP7 698 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 MORN4Q8NDC4 146 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 ZBED6CLQ96FA7 236 aaPredicted RBP19.89■□□□□ 0.77
COL18A1-207ENST00000473212 MED18Q9BUE0 208 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 XKR8Q9H6D3 395 aa19.89■□□□□ 0.77
COL18A1-207ENST00000473212 ATG2BQ96BY7 2078 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 NDUFB5O43674 189 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 OR1F1O43749 312 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 ACP2P11117 423 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 CCL5P13501 91 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 SMSP52788 366 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 EPHA5P54756 1037 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 DUSP2Q05923 314 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 ARHGAP15Q53QZ3 475 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 LCN1P1Q5VSP4 162 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 ADCK2Q7Z695 626 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 AP3S1Q92572 193 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 UFD1Q92890 307 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 SLC35G5Q96KT7 338 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 C17orf62Q9BQA9 187 aa19.88■□□□□ 0.77
COL18A1-207ENST00000473212 C4orf51C9J302 202 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 CACNB4O00305 520 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-207ENST00000473212 ACADMP11310 421 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 ADH5P11766 374 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 FRKP42685 505 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-207ENST00000473212 TPBGQ13641 420 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 NDUFA9Q16795 377 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 C1orf94Q6P1W5 598 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 LINC01555Q8NAE3 123 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 KLK6Q92876 244 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 DPEP2Q9H4A9 486 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 GLIPR2Q9H4G4 154 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 KLHL31Q9H511 634 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 KCNE3Q9Y6H6 103 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 A0A1W2PPV9 198 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 OR6C70A6NIJ9 312 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 SCAMP1O15126 338 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms